RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 TPT1P8Q9HAU6 139 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 PRSS16Q9NQE7 514 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 FAM118AQ9NWS6 357 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 THAP10Q9P2Z0 257 aaPredicted RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 ATP6V1HQ9UI12 483 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SH2B3Q9UQQ2 575 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 PCM1Q15154 2024 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 C1orf226A1L170 272 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 TBC1D3BA6NDS4 549 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SH3BGRLO75368 114 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 PPIBP23284 216 aaKnown RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 FCARP24071 287 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 KDELR2P33947 212 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SHMT2P34897 504 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 OPRD1P41143 372 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 IL12RB1P42701 662 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 ESRRGP62508 458 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 LRRC74AQ0VAA2 488 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 VEZF1Q14119 521 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 NFE2L1Q14494 772 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 STARD3Q14849 445 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 RBBP5Q15291 538 aaKnown RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 HIST2H2ACQ16777 129 aaPredicted RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 HKDC1Q2TB90 917 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 HIST2H2AA3Q6FI13 130 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SPESP1Q6UW49 350 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 NXPE4Q6UWF7 544 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 FAM83HQ6ZRV2 1179 aaPredicted RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 GPR141Q7Z602 305 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 THAP5Q7Z6K1 395 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 HIPK1Q86Z02 1210 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 ZDHHC21Q8IVQ6 265 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 PNPT1Q8TCS8 783 aaKnown RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 CXorf40AQ8TE69 158 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 SLC5A11Q8WWX8 675 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 MBOAT4Q96T53 435 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 NPLQ9BXD5 320 aaPredicted RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 IL1RAPQ9NPH3 570 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 HCN2Q9UL51 889 aa11□□□□□ -0.65
SLC28A1-204ENST00000538177 EXO1Q9UQ84 846 aaKnown RBP11□□□□□ -0.65
SLC28A1-204ENST00000538177 PIPSLA2A3N6 862 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 RNASET2O00584 256 aaKnown RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 PI15O43692 258 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 PCDH7O60245 1069 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 SEMG1P04279 462 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ABCB1P08183 1280 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 CNTN1Q12860 1018 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 RPA4Q13156 261 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 BIRC2Q13490 618 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 SPIDRQ14159 915 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 FAM109BQ6ICB4 259 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 CRTC3Q6UUV7 619 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ARMCX6Q7L4S7 300 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 LPCAT2Q7L5N7 544 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 SYNPOQ8N3V7 929 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ST13P5Q8NFI4 369 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 GPR156Q8NFN8 814 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 AMBRA1Q9C0C7 1298 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 CHST8Q9H2A9 424 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 DMRT3Q9NQL9 472 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 CCDC177Q9NQR7 707 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 DDX18Q9NVP1 670 aaKnown RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 IFT80Q9P2H3 777 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 RPS6KA6Q9UK32 745 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 TSC22D4Q9Y3Q8 395 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 DENND4AQ7Z401 1863 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 GNG14A0A1W2PPG7 69 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ZNF701M0R085 212 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 NOBOXO60393 691 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 E2F6O75461 281 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 TRMUO75648 421 aaKnown RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ZNF682O95780 498 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 PCSK6P29122 969 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 TTKP33981 857 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 PIK3CBP42338 1070 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ZNF763Q0D2J5 394 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 RFX4Q33E94 735 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 LRRC23Q53EV4 343 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ZC3H12BQ5HYM0 836 aaKnown RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 PIP5KL1Q5T9C9 394 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ANKRD34AQ69YU3 496 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 TANGO2Q6ICL3 276 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 SHQ1Q6PI26 577 aaKnown RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 CBLL1Q75N03 491 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 EIF3MQ7L2H7 374 aaKnown RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 COMMD6Q7Z4G1 85 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 PDZD3Q86UT5 571 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 C8orf59Q8N0T1 100 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 LMNTD1Q8N9Z9 388 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 PLA2G15Q8NCC3 412 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ZNF555Q8NEP9 628 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 OR10Q1Q8NGQ4 319 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 GOT1L1Q8NHS2 421 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 ZFP90Q8TF47 636 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 RAD51AP1Q96B01 352 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 BHLHE41Q9C0J9 482 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 REEP4Q9H6H4 257 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 TMEFF2Q9UIK5 374 aaPredicted RBP10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 C3orf18Q9UK00 162 aa10.99□□□□□ -0.65
SLC28A1-204ENST00000538177 CORO2BQ9UQ03 480 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms