RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 BEND4Q6ZU67 534 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 UBQLNLQ8IYU4 475 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 SVOPLQ8N434 492 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 CNTD1Q8N815 330 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 KCTD13Q8WZ19 329 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 HAVCR1Q96D42 359 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF599Q96NL3 588 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 PRAP1Q96NZ9 151 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 TTYH3Q9C0H2 523 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 CRTAC1Q9NQ79 661 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 MAN2B2Q9Y2E5 1009 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 TLL2Q9Y6L7 1015 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 C5P01031 1676 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 MANBAO00462 879 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 MPZL2O60487 215 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 GALTP07902 379 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 ITGA5P08648 1049 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 MRPL3P09001 348 aaKnown RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 GP1BBP13224 206 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 PRKCDQ05655 676 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 TMEM115Q12893 351 aaPredicted RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 DNASE1L3Q13609 305 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 USP53Q70EK8 1073 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 RNF130Q86XS8 419 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 BANPQ8N9N5 519 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 ROPN1LQ96C74 230 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 POLR2J3Q9H1A7 115 aaKnown RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 Q9Y3F1 56 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 CLIC1O00299 241 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 PGLSO95336 258 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 PRH1P02810 166 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 FOSL2P15408 326 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 FBLP22087 321 aaKnown RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 TTKP33981 857 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 GBX2P52951 348 aaPredicted RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 LAPTM4AQ15012 233 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 PLEKHG6Q3KR16 790 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 RBM48Q5RL73 367 aaKnown RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 GPRC6AQ5T6X5 926 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 FRG2Q64ET8 278 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 FITM2Q8N6M3 262 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 TXNDC5Q8NBS9 432 aaKnown RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 FRG2BQ96QU4 278 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF347Q96SE7 839 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 SLC2A4RGQ9NR83 387 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 SPHK2Q9NRA0 654 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 SPATA7Q9P0W8 599 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 B4GALT6Q9UBX8 382 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 GIMAP2Q9UG22 337 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 PLIN4Q96Q06 1357 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 IGLON5A6NGN9 336 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 PTX3P26022 381 aaPredicted RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 PTP4A2Q12974 167 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 GPR33Q49SQ1 333 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 QSOX2Q6ZRP7 698 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 HERC2P3Q9BVR0 1158 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 GPR62Q9BZJ7 368 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 Q9N2J8 555 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 KCND1Q9NSA2 647 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 FAM221BA6H8Z2 402 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 TLR4O00206 839 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 AOC1P19801 751 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 OTX2P32243 289 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 VIPR2P41587 438 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 ARFRP1Q13795 201 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 FAM69BQ5VUD6 431 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 SLC39A5Q6ZMH5 540 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 C12orf40Q86WS4 652 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 KLHL36Q8N4N3 616 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 OR6N1Q8NGY5 312 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 DNAJA4Q8WW22 397 aaPredicted RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 MSLNLQ96KJ4 702 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 ASPNQ9BXN1 380 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 SFXN1Q9H9B4 322 aa10.87□□□□□ -0.67
LINC00346-201ENST00000538077 SPIN1Q9Y657 262 aaPredicted RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 VIRMAQ69YN4 1812 aaKnown RBP10.87□□□□□ -0.67
LINC00346-201ENST00000538077 BEST1O76090 585 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 VEGFBP49765 207 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 SNU13P55769 128 aaKnown RBP10.86□□□□□ -0.67
LINC00346-201ENST00000538077 DUOXA1Q1HG43 343 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 PDSS1Q5T2R2 415 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 RNF220Q5VTB9 566 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 RIT1Q92963 219 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 CENPNQ96H22 339 aaPredicted RBP10.86□□□□□ -0.67
LINC00346-201ENST00000538077 PRR11Q96HE9 360 aaPredicted RBP10.86□□□□□ -0.67
LINC00346-201ENST00000538077 DMRTB1Q96MA1 342 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 BARD1Q99728 777 aaKnown RBP10.86□□□□□ -0.67
LINC00346-201ENST00000538077 NUSAP1Q9BXS6 441 aaKnown RBP10.86□□□□□ -0.67
LINC00346-201ENST00000538077 SEZ6LQ9BYH1 1024 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 OR1A2Q9Y585 309 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 TRBC2A0A5B9 178 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 ZSCAN5BA6NJL1 495 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 FAM170BA6NMN3 283 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 PDCD5O14737 125 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 AHSGP02765 367 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 OR3A3P47888 321 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 OR3A2P47893 321 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 ERVK-8P63133 956 aa10.86□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF782Q6ZMW2 699 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms