RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CCDC137Q6PK04 289 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 VN1R4Q7Z5H5 301 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 TICAM1Q8IUC6 712 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 RASGEF1CQ8N431 466 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 SUN3Q8TAQ9 357 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 RELTQ969Z4 430 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 THAP11Q96EK4 314 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 VN1R1Q9GZP7 353 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PCBD2Q9H0N5 130 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 STMN3Q9NZ72 180 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 TEKT2Q9UIF3 430 aa18.62■□□□□ 0.57
TNFRSF1B-204ENST00000536782 OR5H15A6NDH6 313 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 RASAL1O95294 804 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CRYABP02511 175 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 TBPL1P62380 186 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 SNRPNP63162 240 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MPP1Q00013 466 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ZNF33BQ06732 778 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MINDY4Q4G0A6 757 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 HSP90AA5PQ58FG0 334 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 UGT3A1Q6NUS8 523 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 GFRALQ6UXV0 394 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 OR51Q1Q8NH59 317 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PBKQ96KB5 322 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 SIGLEC10Q96LC7 697 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CCDC138Q96M89 665 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CYTH2Q99418 400 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 FAM167BQ9BTA0 163 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 AARSD1Q9BTE6 412 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 C19orf25Q9UFG5 118 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 TRMT6Q9UJA5 497 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ENTPD4Q9Y227 616 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 NEU2Q9Y3R4 380 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 SCN2AQ99250 2005 aa18.61■□□□□ 0.57
TNFRSF1B-204ENST00000536782 FBN2P35556 2912 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 OTOGQ6ZRI0 2925 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PKDREJQ9NTG1 2253 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 HNRNPRO43390 633 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 SEC24DO94855 1032 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 XCR1P46094 333 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CCZ1BP86790 482 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CCZ1P86791 482 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PTK6Q13882 451 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CYP1B1Q16678 543 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 TMEM214Q6NUQ4 689 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PRSS41Q7RTY9 318 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CPEB2Q7Z5Q1 589 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PALM2Q8IXS6 379 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 AGGF1Q8N302 714 aaeCLIP18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 AMER2Q8N7J2 671 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 NAT8LQ8N9F0 302 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CAMKVQ8NCB2 501 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 DNAJB8Q8NHS0 232 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MS4A14Q96JA4 679 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 MACROD1Q9BQ69 325 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 IARS2Q9NSE4 1012 aaKnown RBP18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 HCN3Q9P1Z3 774 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ABI3Q9P2A4 366 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PPP2R2CQ9Y2T4 447 aa18.6■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PDZD2O15018 2839 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 IGHV3-20A0A0C4DH32 117 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 A8MUI8 341 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PRAMEF2O60811 474 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 C8GP07360 202 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 IL1RNP18510 177 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 BCL6P41182 706 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 RGS4P49798 205 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 CSNK1G2P78368 415 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 BTBD16Q32M84 506 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 SP5Q6BEB4 398 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PLAG1Q6DJT9 500 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 TMEM207Q6UWW9 146 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 LANCL3Q6ZV70 420 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 C17orf64Q86WR6 236 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 EEF1AKMT1Q8WVE0 214 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 NAP1L3Q99457 506 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 FAM129AQ9BZQ8 928 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PARVBQ9HBI1 364 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ANKHQ9HCJ1 492 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 COPG2Q9UBF2 871 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 ADAMTS6Q9UKP5 1117 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 PDE10AQ9Y233 779 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 JRKLQ9Y4A0 524 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 DCHS2Q6V1P9 2916 aa18.59■□□□□ 0.57
TNFRSF1B-204ENST00000536782 FEZF1A0PJY2 475 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PRSS44E7EML9 344 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SGK494L7N484 410 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 UNC5CO95185 931 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CCND1P24385 295 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 GRK3P35626 688 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 AGTR2P50052 363 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SP140Q13342 867 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 AGTRAPQ6RW13 159 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ASPGQ86U10 573 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PPIL6Q8IXY8 311 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 C2CD4AQ8NCU7 369 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 GABPB2Q8TAK5 448 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ZCCHC10Q8TBK6 192 aa18.58■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MARVELD3Q96A59 401 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms