RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ZNF460Q14592 562 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ZKSCAN8Q15776 578 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MUM1Q2TAK8 710 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 HKDC1Q2TB90 917 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PRAMEF13Q5VWM6 474 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 AGTRAPQ6RW13 159 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ADCK2Q7Z695 626 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TDRPQ86YL5 185 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PLD3Q8IV08 490 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 NKAPQ8N5F7 415 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 OR2W6PQ8NHA6 318 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PRAP1Q96NZ9 151 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 P4HTMQ9NXG6 502 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 UTP6Q9NYH9 597 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 IKZF3Q9UKT9 509 aa17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RUVBL1Q9Y265 456 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SHANK1Q9Y566 2161 aa17.02■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SMIM23A6NLE4 172 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 VSTM2BA6NLU5 285 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TRIM49D1C9J1S8 452 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PHGDHO43175 533 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TYK2P29597 1187 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 EMP3P54852 163 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 RASA2Q15283 850 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 DCAF10Q5QP82 559 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CCDC91Q7Z6B0 441 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CMC1Q7Z7K0 106 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ARHGEF39Q8N4T4 335 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CSNK1A1LQ8N752 337 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 EPS8L3Q8TE67 593 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PDLIM5Q96HC4 596 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 NUDT9Q9BW91 350 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ROPN1BQ9BZX4 212 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ROPN1Q9HAT0 212 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ZNF304Q9HCX3 659 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SNX15Q9NRS6 342 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TBK1Q9UHD2 729 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 UBR5O95071 2799 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 UQCRHLA0A096LP55 91 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TLDC2A0PJX2 215 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MASP2O00187 686 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 P2RX6O15547 441 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 WISP1O95388 367 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ZIC2O95409 532 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 UQCRHP07919 91 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 HIST1H2AGP0C0S8 130 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 H2AFXP16104 143 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 HIST1H2ADP20671 130 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MMP11P24347 488 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PGDP52209 483 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 NAE1Q13564 534 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PRMT9Q6P2P2 845 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SBSNQ6UWP8 590 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 RIBC1Q8N443 379 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TEX19Q8NA77 164 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 HIST1H2AHQ96KK5 128 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 HIST1H2AJQ99878 128 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 H2AFJQ9BTM1 129 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SGPP1Q9BX95 441 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PCBD2Q9H0N5 130 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SOX17Q9H6I2 414 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TMEM184CQ9NVA4 438 aa17.01■□□□□ 0.31
TNFRSF1A-209ENST00000536717 A6NL46 340 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ALDOAP04075 364 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 AP1S2P56377 157 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 LCTLQ6UWM7 567 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SHISA6Q6ZSJ9 500 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TBC1D1Q86TI0 1168 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 RERGQ96A58 199 aaPredicted RBP17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 COL26A1Q96A83 441 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 NACC2Q96BF6 587 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 FER1L6-AS2Q96M78 137 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ARL15Q9NXU5 204 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CTNNAL1Q9UBT7 734 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 NXT1Q9UKK6 140 aaKnown RBP17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ACOT9Q9Y305 439 aa17■□□□□ 0.31
TNFRSF1A-209ENST00000536717 IGLV3-12A0A075B6K2 115 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 A0A087X1B8 175 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 A0A096LPK6 155 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 AGPSO00116 658 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PEX12O00623 359 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SOCS6O14544 535 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SLC35E2BP0CK96 405 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CCND1P24385 295 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 HRH2P25021 359 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 SNRPNP63162 240 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 CSNK1G2P78368 415 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PPP1R3AQ16821 1122 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 GARNL3Q5VVW2 1013 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 VN1R4Q7Z5H5 301 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 IQCKQ8N0W5 287 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 OR56A3Q8NH54 315 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 STT3BQ8TCJ2 826 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ISL2Q96A47 359 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 ALKBH8Q96BT7 664 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 PYCR2Q96C36 320 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 MVB12AQ96EY5 273 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 TMEM109Q9BVC6 243 aa16.99■□□□□ 0.31
TNFRSF1A-209ENST00000536717 GPR83Q9NYM4 423 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms