RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 B3GALT6Q96L58 329 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 YTHDF1Q9BYJ9 559 aaKnown RBP3.29□□□□□ -1.88
VBP1-203ENST00000535916 OCR1Q9BZK8 76 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 DNAI2Q9GZS0 605 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 SYNCQ9H7C4 482 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 ABCD2Q9UBJ2 740 aa3.29□□□□□ -1.88
VBP1-203ENST00000535916 TDRD6O60522 2096 aaKnown RBP3.28□□□□□ -1.88
VBP1-203ENST00000535916 A0A1W2PPQ1 181 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 A0A1W2PRQ8 180 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 GLTPD2A6NH11 291 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 SLC1A7O00341 560 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 DOK2O60496 412 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 VDRP11473 427 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 AADACP22760 399 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 MC1RQ01726 317 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 KIAA0141Q14154 515 aaPredicted RBP3.28□□□□□ -1.88
VBP1-203ENST00000535916 PCLAFQ15004 111 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 ATAD3CQ5T2N8 411 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 RSBN1Q5VWQ0 802 aaPredicted RBP3.28□□□□□ -1.88
VBP1-203ENST00000535916 SZRD1Q7Z422 152 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 GPC2Q8N158 579 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 C17orf53Q8N3J3 647 aaPredicted RBP3.28□□□□□ -1.88
VBP1-203ENST00000535916 C4orf32Q8N8J7 132 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 CHURC1Q8WUH1 139 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 RSPH9Q9H1X1 276 aaPredicted RBP3.28□□□□□ -1.88
VBP1-203ENST00000535916 RNF150Q9ULK6 438 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 GPR34Q9UPC5 381 aa3.28□□□□□ -1.88
VBP1-203ENST00000535916 RSF1Q96T23 1441 aaPredicted RBP3.27□□□□□ -1.89
VBP1-203ENST00000535916 FSD2A1L4K1 749 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 ZBED4O75132 1171 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 LY6G6DO95868 133 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 RENP00797 406 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 RAB40ALP0C0E4 278 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 ALDH1B1P30837 517 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 STAT2P52630 851 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 CLNS1AP54105 237 aaKnown RBP3.27□□□□□ -1.89
VBP1-203ENST00000535916 RUNX3Q13761 415 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 C15orf59Q2T9L4 293 aaPredicted RBP3.27□□□□□ -1.89
VBP1-203ENST00000535916 AGAP7PQ5VUJ5 663 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 ZNF622Q969S3 477 aaKnown RBP eCLIP3.27□□□□□ -1.89
VBP1-203ENST00000535916 MGME1Q9BQP7 344 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 NUDT16L1Q9BRJ7 211 aaKnown RBP3.27□□□□□ -1.89
VBP1-203ENST00000535916 PRRG4Q9BZD6 226 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 ALDH8A1Q9H2A2 487 aaPredicted RBP3.27□□□□□ -1.89
VBP1-203ENST00000535916 GHITMQ9H3K2 345 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 PRMT7Q9NVM4 692 aaPredicted RBP3.27□□□□□ -1.89
VBP1-203ENST00000535916 NSMCE4AQ9NXX6 385 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 NAALAD2Q9Y3Q0 740 aa3.27□□□□□ -1.89
VBP1-203ENST00000535916 CASTOR2A6NHX0 329 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 ARHGEF33A8MVX0 844 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 IPO8O15397 1037 aaKnown RBP3.26□□□□□ -1.89
VBP1-203ENST00000535916 BAG3O95817 575 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 PFKFB1P16118 471 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 EDNRAP25101 427 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 LMO2P25791 158 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 ZNF75DP51815 510 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 NAP1L1P55209 391 aaKnown RBP3.26□□□□□ -1.89
VBP1-203ENST00000535916 CREB5Q02930 508 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 CUL3Q13618 768 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 SIX1Q15475 284 aaPredicted RBP3.26□□□□□ -1.89
VBP1-203ENST00000535916 SNAPC1Q16533 368 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 UPP1Q16831 310 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 Q1RN00 199 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 CBWD6Q4V339 395 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 CBWD3Q5JTY5 395 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 OR4C11Q6IEV9 310 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 LINC00346Q8IVM7 164 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 NOA1Q8NC60 698 aaKnown RBP3.26□□□□□ -1.89
VBP1-203ENST00000535916 OR4Q3Q8NH05 313 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 PI4K2AQ9BTU6 479 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 GOLPH3LQ9H4A5 285 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 HACD3Q9P035 362 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 CRNNQ9UBG3 495 aaPredicted RBP3.26□□□□□ -1.89
VBP1-203ENST00000535916 IL17BQ9UHF5 180 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 IKZF3Q9UKT9 509 aa3.26□□□□□ -1.89
VBP1-203ENST00000535916 A0A1W2PPK0 400 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 MTMR11A4FU01 709 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 FAM220BPB1ANY3 271 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 RPN1P04843 607 aaKnown RBP3.25□□□□□ -1.89
VBP1-203ENST00000535916 GLULP15104 373 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 HOXD13P35453 343 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 ERVK-16P61578 105 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 PSMC6P62333 389 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 ROR1Q01973 937 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 C9orf66Q5T8R8 295 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 KHDRBS2Q5VWX1 349 aaKnown RBP3.25□□□□□ -1.89
VBP1-203ENST00000535916 LEMD1Q68G75 181 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 TCEANCQ8N8B7 351 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 CFAP61Q8NHU2 1237 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 MOB3AQ96BX8 217 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 KLHL5Q96PQ7 755 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 CDCA3Q99618 268 aaPredicted RBP3.25□□□□□ -1.89
VBP1-203ENST00000535916 SDF4Q9BRK5 362 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 SLC2A11Q9BYW1 496 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 CCDC68Q9H2F9 335 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 ZCCHC17Q9NP64 241 aaKnown RBP3.25□□□□□ -1.89
VBP1-203ENST00000535916 GIMAP2Q9UG22 337 aa3.25□□□□□ -1.89
VBP1-203ENST00000535916 E9PAM4 449 aa3.24□□□□□ -1.89
VBP1-203ENST00000535916 PDHXO00330 501 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms