RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 FPR1P21462 350 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 HTR1BP28222 390 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 IMPA1P29218 277 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 FMO3P31513 532 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 CLK3P49761 638 aaKnown RBP12.7□□□□□ -0.38
LDLR-203ENST00000535915 KDM4DQ6B0I6 523 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
LDLR-203ENST00000535915 CRTC3Q6UUV7 619 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 CBLL1Q75N03 491 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 EIF3MQ7L2H7 374 aaKnown RBP12.7□□□□□ -0.38
LDLR-203ENST00000535915 ZNF557Q8N988 423 aaPredicted RBP12.7□□□□□ -0.38
LDLR-203ENST00000535915 GLMNQ92990 594 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 GLYATL1Q969I3 302 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 ABHD8Q96I13 439 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 PKP4Q99569 1192 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 RAD21L1Q9H4I0 556 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 BRF2Q9HAW0 419 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 RAD18Q9NS91 495 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 FAIMQ9NVQ4 179 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 FZD4Q9ULV1 537 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 GMPPBQ9Y5P6 360 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 KIAA1549LQ6ZVL6 1849 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 MYO7AQ13402 2215 aa12.7□□□□□ -0.38
LDLR-203ENST00000535915 GNG14A0A1W2PPG7 69 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 MGAT4DA6NG13 374 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 RFPL2O75678 378 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 SEMG1P04279 462 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 HSD3B1P14060 373 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ITIH1P19827 911 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 PCMT1P22061 227 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ITGB8P26012 769 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 HSD3B2P26439 372 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ASMTP46597 345 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 MNX1P50219 401 aaPredicted RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 RAE1P78406 368 aaKnown RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 TMEM115Q12893 351 aaPredicted RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 ACOX1Q15067 660 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 TMEM220Q6QAJ8 160 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 GPR155Q7Z3F1 870 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ZNF366Q8N895 744 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 TTC29Q8NA56 475 aaPredicted RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 OR7G3Q8NG95 312 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 FBLIM1Q8WUP2 373 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ZNF566Q969W8 418 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 FKBP10Q96AY3 582 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 FOPNLQ96NB1 174 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 MYOCQ99972 504 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 CCM2Q9BSQ5 444 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 SPATA7Q9P0W8 599 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 NAALAD2Q9Y3Q0 740 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 WNT6Q9Y6F9 365 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ZNF99A8MXY4 864 aaPredicted RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 MAN1A2O60476 641 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 NDUFS2O75306 463 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 NTRK1P04629 796 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 NUDT7P0C024 238 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 TFPTP0C1Z6 253 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ELFN1P0C7U0 828 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 PDHA2P29803 388 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 BMXP51813 675 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 GP2P55259 537 aaKnown RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 EMX1Q04741 257 aaPredicted RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 TSTA3Q13630 321 aaPredicted RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 KEAP1Q14145 624 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ZNF805Q5CZA5 627 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 CAPN13Q6MZZ7 669 aaPredicted RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 C16orf87Q6PH81 154 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 B3GNT8Q7Z7M8 397 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 SYNPOQ8N3V7 929 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ATG16L2Q8NAA4 619 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 HUS1BQ8NHY5 278 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 AP2M1Q96CW1 435 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 C11orf24Q96F05 449 aaPredicted RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 PLEKHA8Q96JA3 519 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 MRGPRX3Q96LB0 322 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 REEP1Q9H902 201 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 KRT84Q9NSB2 600 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 NOTCH4Q99466 2003 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 SLC5A10A0PJK1 596 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 CLPXO76031 633 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 AQP1P29972 269 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 HPCAL1P37235 193 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 PRLHRP49683 370 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 PSMD7P51665 324 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 C21orf58P58505 322 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 VEZF1Q14119 521 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 SPCS2Q15005 226 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 ARHGAP15Q53QZ3 475 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 GALNT18Q6P9A2 607 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 DPPA4Q7L190 304 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 OTOP2Q7RTS6 562 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 TECPR1Q7Z6L1 1165 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 TMPRSS11BQ86T26 416 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 NPAS3Q8IXF0 933 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 GIPC3Q8TF64 312 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 METTL2AQ96IZ6 378 aaKnown RBP12.69□□□□□ -0.38
LDLR-203ENST00000535915 VPS35Q96QK1 796 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 APOL4Q9BPW4 351 aa12.69□□□□□ -0.38
LDLR-203ENST00000535915 TCF25Q9BQ70 676 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms