RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 NOVP48745 357 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 SLC26A2P50443 739 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 SUOXP51687 545 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 FOXM1Q08050 763 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 FAM174BQ3ZCQ3 159 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 Q4G0T1 1027 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 Q5PR19 223 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 PQLC2Q6ZP29 291 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 TRMT1LQ7Z2T5 733 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 TSPAN33Q86UF1 283 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 AACSQ86V21 672 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 DNAAF5Q86Y56 855 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 ANKRD13BQ86YJ7 626 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 SFTPA2Q8IWL1 248 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 MB21D2Q8IYB1 491 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 IQCKQ8N0W5 287 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 MAB21L3Q8N8X9 362 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 ARRDC2Q8TBH0 407 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 UBE2Q2Q8WVN8 375 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 COQ8BQ96D53 544 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 RRNAD1Q96FB5 475 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 KLHL4Q9C0H6 718 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 KCNN2Q9H2S1 579 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 CPVLQ9H3G5 476 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 HRH4Q9H3N8 390 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 MKKSQ9NPJ1 570 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 CISD1Q9NZ45 108 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 MARCH4Q9P2E8 410 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 R3HDM2Q9Y2K5 976 aaKnown RBP4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 CMAHPQ9Y471 501 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 LOXL2Q9Y4K0 774 aa4.34□□□□□ -1.71
ECHDC1-223ENST00000534442 HRNRQ86YZ3 2850 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 A0A1W2PRQ8 180 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CPED1A4D0V7 1026 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 VCYO14598 125 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 LDB2O43679 373 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 JRKO75564 520 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 MTA2O94776 668 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 IGLV3-19P01714 112 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 KLKB1P03952 638 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CYC1P08574 325 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 TOP1P11387 765 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 TRIM21P19474 475 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 MYF6P23409 242 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CHATP28329 748 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 PIGAP37287 484 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 TDO2P48775 406 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 PNLIPRP2P54317 469 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 TAS2R40P59535 323 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF177Q13360 481 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF77Q15935 545 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CDKN3Q16667 212 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 KYNUQ16719 465 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 MMEL1Q495T6 779 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 FUT11Q495W5 492 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 ADALQ6DHV7 355 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 GUSBP11Q6P575 273 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 DPPA4Q7L190 304 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CATSPER4Q7RTX7 472 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 EFL1Q7Z2Z2 1120 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 NKAIN3Q8N8D7 197 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 SYT2Q8N9I0 419 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 TMEM163Q8TC26 289 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 SLC35F5Q8WV83 523 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 STARD8Q92502 1023 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 PNPLA2Q96AD5 504 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CCDC34Q96HJ3 373 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CDHR1Q96JP9 859 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 EGLN2Q96KS0 407 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 PAFAH2Q99487 392 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 MEIS3Q99687 375 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 GCOM2Q9BZD3 368 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 STRADBQ9C0K7 418 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 OR10A4Q9H209 315 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 GPN2Q9H9Y4 310 aaPredicted RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 HINT3Q9NQE9 182 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 ERVK-11Q9UQG0 969 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 HES2Q9Y543 173 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CLIC4Q9Y696 253 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 STON1Q9Y6Q2 735 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 DYNC2H1Q8NCM8 4307 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 CACNA1CQ13936 2221 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF638Q14966 1978 aaKnown RBP4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
ECHDC1-223ENST00000534442 SEC16AO15027 2179 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 I3L4J1 428 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 I6L893 689 aaPredicted RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 OGG1O15527 345 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 NDUFB4O95168 129 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 NDUFB8O95169 186 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 CELA2AP08217 269 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 FGF2P09038 288 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 TCN2P20062 427 aa4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 ANXA7P20073 488 aaKnown RBP4.32□□□□□ -1.72
ECHDC1-223ENST00000534442 TBXAS1P24557 533 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms