RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 LUZP4Q9P127 313 aa22.1■■□□□ 1.13
YIF1A-213ENST00000534374 NOVA2Q9UNW9 492 aaKnown RBP22.1■■□□□ 1.13
YIF1A-213ENST00000534374 SPTBN1Q01082 2364 aaKnown RBP22.09■■□□□ 1.13
YIF1A-213ENST00000534374 FAM187AA6NFU0 413 aa22.09■■□□□ 1.13
YIF1A-213ENST00000534374 NSA2O95478 260 aaKnown RBP22.09■■□□□ 1.13
YIF1A-213ENST00000534374 ZC3HC1Q86WB0 502 aaKnown RBP22.09■■□□□ 1.13
YIF1A-213ENST00000534374 OR4K1Q8NGD4 311 aa22.09■■□□□ 1.13
YIF1A-213ENST00000534374 THOC3Q96J01 351 aaKnown RBP22.09■■□□□ 1.13
YIF1A-213ENST00000534374 ERP44Q9BS26 406 aa22.09■■□□□ 1.13
YIF1A-213ENST00000534374 SH2B3Q9UQQ2 575 aa22.09■■□□□ 1.13
YIF1A-213ENST00000534374 USP9YO00507 2555 aaPredicted RBP22.09■■□□□ 1.13
YIF1A-213ENST00000534374 LCMT2O60294 686 aaKnown RBP22.08■■□□□ 1.13
YIF1A-213ENST00000534374 ALOX12BO75342 701 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 HEXBP07686 556 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 CYC1P08574 325 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 GNLYP22749 145 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 Q0VFX4 171 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 FASTKD3Q14CZ7 662 aaKnown RBP22.08■■□□□ 1.13
YIF1A-213ENST00000534374 CRB2Q5IJ48 1285 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 TMEM214Q6NUQ4 689 aaKnown RBP22.08■■□□□ 1.13
YIF1A-213ENST00000534374 TMEM207Q6UWW9 146 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 STRA8Q7Z7C7 330 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 NKAPQ8N5F7 415 aaKnown RBP22.08■■□□□ 1.13
YIF1A-213ENST00000534374 SPATA4Q8NEY3 305 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 PPP4R1Q8TF05 950 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 ALKBH8Q96BT7 664 aaKnown RBP22.08■■□□□ 1.13
YIF1A-213ENST00000534374 C8orf44Q96CB5 159 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 SNRNP40Q96DI7 357 aaKnown RBP22.08■■□□□ 1.13
YIF1A-213ENST00000534374 WDR77Q9BQA1 342 aaPredicted RBP22.08■■□□□ 1.13
YIF1A-213ENST00000534374 SLC29A3Q9BZD2 475 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 ILKAPQ9H0C8 392 aaPredicted RBP22.08■■□□□ 1.13
YIF1A-213ENST00000534374 WHRNQ9P202 907 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 PSAT1Q9Y617 370 aa22.08■■□□□ 1.13
YIF1A-213ENST00000534374 SCN3AQ9NY46 2000 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 SPTAN1Q13813 2472 aaKnown RBP22.07■■□□□ 1.12
YIF1A-213ENST00000534374 HIVEP3Q5T1R4 2406 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 POLEQ07864 2286 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 LOC102723996A0A087X1L8 192 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 NSG1A0A0A6YYJ2 146 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 BMP10O95393 424 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 COX6A1P12074 109 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 CDH1P12830 882 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 ZNF37AP17032 561 aaPredicted RBP22.07■■□□□ 1.12
YIF1A-213ENST00000534374 CCR8P51685 355 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 PGGT1BP53609 377 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 CALCOCO2Q13137 446 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 PRR30Q53SZ7 412 aaPredicted RBP22.07■■□□□ 1.12
YIF1A-213ENST00000534374 TMEM205Q6UW68 189 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 ISLR2Q6UXK2 745 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 CYS1Q717R9 158 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 ASPGQ86U10 573 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 ZC3H7AQ8IWR0 971 aaKnown RBP22.07■■□□□ 1.12
YIF1A-213ENST00000534374 KBTBD2Q8IY47 623 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 ZBED8Q8IZ13 594 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 MFSD9Q8NBP5 474 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 OR9A4Q8NGU2 314 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 SLC13A3Q8WWT9 602 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 MESP1Q9BRJ9 268 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 ZNF160Q9HCG1 818 aa22.07■■□□□ 1.12
YIF1A-213ENST00000534374 MRPS2Q9Y399 296 aaKnown RBP22.07■■□□□ 1.12
YIF1A-213ENST00000534374 FEZF1A0PJY2 475 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 TCP11X1B4DZS4 312 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 FFAR3O14843 346 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 EIF3HO15372 352 aaKnown RBP eCLIP22.06■■□□□ 1.12
YIF1A-213ENST00000534374 GPR42O15529 346 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 BCL6P41182 706 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 UQCRFS1P47985 274 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 SYT16Q17RD7 645 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 SBSNQ6UWP8 590 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 CISD2Q8N5K1 135 aaKnown RBP22.06■■□□□ 1.12
YIF1A-213ENST00000534374 PYROXD1Q8WU10 500 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 PYCR2Q96C36 320 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 VPS39Q96JC1 886 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 OR4K3Q96R72 315 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 BARD1Q99728 777 aaKnown RBP22.06■■□□□ 1.12
YIF1A-213ENST00000534374 MCMBPQ9BTE3 642 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 RHOJQ9H4E5 214 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 EPS8L2Q9H6S3 715 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 MKL2Q9ULH7 1088 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 SLC22A7Q9Y694 548 aa22.06■■□□□ 1.12
YIF1A-213ENST00000534374 IGHV1-45A0A0A0MS14 117 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 FAM95CA0A1B0GW59 222 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 GUCA1CO95843 209 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 SERPINA7P05543 415 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 ICAM2P13598 275 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 MAT1AQ00266 395 aaKnown RBP22.05■■□□□ 1.12
YIF1A-213ENST00000534374 FHL5Q5TD97 284 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 RIPOR1Q6ZS17 1223 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 CUZD1Q86UP6 607 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 TBC1D19Q8N5T2 526 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 DNAJB14Q8TBM8 379 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 C19orf60Q96EN9 201 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 MACROD1Q9BQ69 325 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 POPDC3Q9HBV1 291 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 ANKHQ9HCJ1 492 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 RIC8BQ9NVN3 520 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 PCDHGA10Q9Y5H3 936 aa22.05■■□□□ 1.12
YIF1A-213ENST00000534374 COPG1Q9Y678 874 aaKnown RBP22.05■■□□□ 1.12
YIF1A-213ENST00000534374 STATHP02808 62 aa22.04■■□□□ 1.12
YIF1A-213ENST00000534374 SLC35G6P0C7Q6 338 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms