RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 ESR2Q92731 530 aa5.96□□□□□ -1.45
CHEK1-216ENST00000534070 LIN37Q96GY3 246 aaPredicted RBP5.96□□□□□ -1.45
CHEK1-216ENST00000534070 HIST1H2AHQ96KK5 128 aa5.96□□□□□ -1.45
CHEK1-216ENST00000534070 HIST1H2AJQ99878 128 aa5.96□□□□□ -1.45
CHEK1-216ENST00000534070 PNPLA3Q9NST1 481 aa5.96□□□□□ -1.45
CHEK1-216ENST00000534070 KCNN3Q9UGI6 736 aa5.96□□□□□ -1.45
CHEK1-216ENST00000534070 PCDHA12Q9UN75 941 aa5.96□□□□□ -1.45
CHEK1-216ENST00000534070 ERVK-11Q9UQG0 969 aa5.96□□□□□ -1.45
CHEK1-216ENST00000534070 CHMP2BQ9UQN3 213 aa5.96□□□□□ -1.45
CHEK1-216ENST00000534070 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 FAM230AA0A1W2PPH8 454 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 NPIPB5A8MRT5 1133 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 VHLP40337 213 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 MC3RP41968 323 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SLC6A12P48065 614 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 CNN1P51911 297 aaKnown RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 ATP5J2P56134 94 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 LSM11P83369 360 aaKnown RBP eCLIP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SPCS2Q15005 226 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 EXT1Q16394 746 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 PDLIM3Q53GG5 364 aaPredicted RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 TRMT10CQ7L0Y3 403 aaKnown RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 ZNF598Q86UK7 904 aaKnown RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 GPAT4Q86UL3 456 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 PALB2Q86YC2 1186 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 ZBED8Q8IZ13 594 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SPARTQ8N0X7 666 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SLC35B2Q8TB61 432 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 DYDC1Q8WWB3 177 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 ULK4Q96C45 1275 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 TRNT1Q96Q11 434 aaKnown RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 NPAS2Q99743 824 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SLC46A2Q9BY10 475 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 PDZD7Q9H5P4 517 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 WDR55Q9H6Y2 383 aaPredicted RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 BARX1Q9HBU1 254 aaPredicted RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 KLHL1Q9NR64 748 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SORCS3Q9UPU3 1222 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 MRPS33Q9Y291 106 aaKnown RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 PALLDQ8WX93 1383 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 GRID2IPA4D2P6 1211 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 ERVV-2B6SEH9 535 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 MAGEB2O15479 319 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 ATP9AO75110 1047 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 LEFTY1O75610 366 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SERPINI2O75830 405 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 LYNP07948 512 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 GSTT2P0CG29 244 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 GSTT2BP0CG30 244 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 HNF1AP20823 631 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 KCNA3P22001 575 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 GTF2H1P32780 548 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 MMP12P39900 470 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 HSD11B2P80365 405 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 RRP1BQ14684 758 aaKnown RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 LY6KQ17RY6 165 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 PPP6R3Q5H9R7 873 aaPredicted RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 RNF43Q68DV7 783 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 PM20D2Q8IYS1 436 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 GPR137CQ8N3F9 429 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 GUF1Q8N442 669 aaKnown RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 FITM2Q8N6M3 262 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SCAIQ8N9R8 606 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 FNDC5Q8NAU1 212 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 MINDY2Q8NBR6 621 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SLC20A1Q8WUM9 679 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 PIGKQ92643 395 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 HPS1Q92902 700 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 OTUB1Q96FW1 271 aaPredicted RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 ZNF514Q96K75 400 aaPredicted RBP5.96□□□□□ -1.46
CHEK1-216ENST00000534070 C7orf34Q96L11 122 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 MYRFLQ96LU7 910 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 OLFM3Q96PB7 478 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 DIRC2Q96SL1 478 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SH2D3AQ9BRG2 576 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 DCLRE1BQ9H816 532 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 ERVK13-1Q9NX77 482 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 CDH22Q9UJ99 828 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 HEY1Q9Y5J3 304 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 CCDC88AQ3V6T2 1871 aa5.96□□□□□ -1.46
CHEK1-216ENST00000534070 SMIM31A0A1B0GVY4 71 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 TMEM82A0PJX8 343 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 CDRT15L2A8MXV6 281 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 HAS3O00219 553 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 ANKRD28O15084 1053 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 TOMM70O94826 608 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 DGKAP23743 735 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 TRIM23P36406 574 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 TOB1P50616 345 aaPredicted RBP5.95□□□□□ -1.46
CHEK1-216ENST00000534070 RPS8P62241 208 aaKnown RBP5.95□□□□□ -1.46
CHEK1-216ENST00000534070 BNC1Q01954 994 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 CALCOCO2Q13137 446 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 SLC18A3Q16572 532 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 IL23RQ5VWK5 629 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 C8orf74Q6P047 294 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 ARSKQ6UWY0 536 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 OR4A16Q8NH70 328 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 RIT1Q92963 219 aa5.95□□□□□ -1.46
CHEK1-216ENST00000534070 GTPBP3Q969Y2 492 aaKnown RBP5.95□□□□□ -1.46
CHEK1-216ENST00000534070 GBA3Q9H227 469 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms