RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 LMAN2Q12907 356 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 EFR3AQ14156 821 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 NFE2L1Q14494 772 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ABRAXAS2Q15018 415 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 CDC73Q6P1J9 531 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 C22orf39Q6P5X5 142 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ERICH5Q6P6B1 374 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 C17orf99Q6UX52 265 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 OR5H6Q8NGV6 325 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 LCN9Q8WX39 176 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 TMIGD2Q96BF3 282 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ADAP2Q9NPF8 381 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 MAPRE3Q9UPY8 281 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 NUP214P35658 2090 aaPredicted RBP11.88□□□□□ -0.51
BDNF-218ENST00000533246 DNAJC13O75165 2243 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 AIREO43918 545 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ERN1O75460 977 aaKnown RBP11.88□□□□□ -0.51
BDNF-218ENST00000533246 CREG1O75629 220 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 SAGP10523 405 aaPredicted RBP11.88□□□□□ -0.51
BDNF-218ENST00000533246 RGS8P57771 180 aaPredicted RBP11.88□□□□□ -0.51
BDNF-218ENST00000533246 BIKQ13323 160 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 PKDCCQ504Y2 493 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.88□□□□□ -0.51
BDNF-218ENST00000533246 ALKBH2Q6NS38 261 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ZNF534Q76KX8 674 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 IZUMO1Q8IYV9 350 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 PSD4Q8NDX1 1056 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 RAB8BQ92930 207 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 RERGQ96A58 199 aaPredicted RBP11.88□□□□□ -0.51
BDNF-218ENST00000533246 SLC38A2Q96QD8 506 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 ZIC5Q96T25 663 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 SGIP1Q9BQI5 828 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 DHRS4Q9BTZ2 278 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 TAC3Q9UHF0 121 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 KCNK6Q9Y257 313 aa11.88□□□□□ -0.51
BDNF-218ENST00000533246 FADS2P1A8MWK0 482 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 LOC110117498-PIK3R3F6TDL0 507 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 LEFTY2O00292 366 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 VILLO15195 856 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 NUPL2O15504 423 aaKnown RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 ADAM12O43184 909 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TBX1O43435 398 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 SMAD6O43541 496 aaKnown RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 PI15O43692 258 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 FAM189A1O60320 539 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 EFCAB14O75071 495 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 NDUFS2O75306 463 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 GADD45GO95257 159 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TFAP2AP05549 437 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 DCST1Q5T197 706 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TAS1R1Q7RTX1 841 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 GHDCQ8N2G8 530 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TMEM145Q8NBT3 493 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 ANKK1Q8NFD2 765 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TEX47Q8TBZ9 253 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TPT1P8Q9HAU6 139 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 ZIM2Q9NZV7 527 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 GULP1Q9UBP9 304 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 MAFFQ9ULX9 164 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 E2F3O00716 465 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 SULT1B1O43704 296 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 PAK4O96013 591 aaPredicted RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 ZNF10P21506 573 aaPredicted RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 NT5EP21589 574 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 ELK4P28324 431 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 RGRP47804 291 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 DNAJB13P59910 316 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 NTHL1P78549 312 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 ZDHHC20Q5W0Z9 365 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 THOC6Q86W42 341 aaKnown RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 HDDC3Q8N4P3 179 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 KBTBD8Q8NFY9 601 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TMEM203Q969S6 136 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 CTRCQ99895 268 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 WDR83Q9BRX9 315 aaKnown RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 SPATA5L1Q9BVQ7 753 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 CUEDC1Q9NWM3 386 aaPredicted RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 SMIM30A4D0T7 59 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 LEFTY1O75610 366 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 AP2A2O94973 939 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 OAZ2O95190 189 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 PSKH1P11801 424 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 CAPN3P20807 821 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TIE1P35590 1138 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 HNRNPFP52597 415 aaKnown RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 RAB8AP61006 207 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 RPS13P62277 151 aaKnown RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 TAGLNQ01995 201 aaKnown RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 HEPACAMQ14CZ8 416 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 NPTX1Q15818 432 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 GTDC1Q4AE62 458 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 ATP13A5Q4VNC0 1218 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 PYDC2Q56P42 97 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 CLEC12AQ5QGZ9 265 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 GALNT13Q8IUC8 556 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 ADGRG2Q8IZP9 1017 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 OR52L1Q8NGH7 329 aa11.87□□□□□ -0.51
BDNF-218ENST00000533246 TFGQ92734 400 aaPredicted RBP11.87□□□□□ -0.51
BDNF-218ENST00000533246 HTATIP2Q9BUP3 242 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms