RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 DSCR3O14972 297 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 OR1F1O43749 312 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 SIX3O95343 332 aaPredicted RBP11.43□□□□□ -0.58
SSBP3-214ENST00000533209 KLK3P07288 261 aaPredicted RBP11.43□□□□□ -0.58
SSBP3-214ENST00000533209 TCN2P20062 427 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 SCTRP47872 440 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 EMP3P54852 163 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 UCNP55089 124 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 SNRPNP63162 240 aaKnown RBP11.43□□□□□ -0.58
SSBP3-214ENST00000533209 SLC18A2Q05940 514 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 PCDH1Q08174 1060 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 FAM214AQ32MH5 1076 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 C19orf48Q6RUI8 117 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 FAM198BQ6UWH4 519 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 TTLL10Q6ZVT0 673 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 IQCKQ8N0W5 287 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 DTWD1Q8N5C7 304 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 SNX31Q8N9S9 440 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 ANKRD53Q8N9V6 530 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 KIAA1143Q96AT1 154 aaPredicted RBP11.43□□□□□ -0.58
SSBP3-214ENST00000533209 PHF21BQ96EK2 531 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 WDR34Q96EX3 536 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 CRELD1Q96HD1 420 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 MACROD1Q9BQ69 325 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 DPH2Q9BQC3 489 aaPredicted RBP11.43□□□□□ -0.58
SSBP3-214ENST00000533209 AIF1LQ9BQI0 150 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 EHD1Q9H4M9 534 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 CPNE5Q9HCH3 593 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 TXLNGQ9NUQ3 528 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 GEMIN8Q9NWZ8 242 aaKnown RBP11.43□□□□□ -0.58
SSBP3-214ENST00000533209 EMCNQ9ULC0 261 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 TMCO1Q9UM00 188 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 ZFHX4Q86UP3 3567 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 CCDC151A5D8V7 595 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 A8MT66 165 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 C21orf140B9A014 251 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 STX16-NPEPL1H3BU86 382 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 STX16O14662 325 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 CTIFO43310 598 aaKnown RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 SMIM24O75264 130 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 GLRA3O75311 464 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 H2AFYO75367 372 aaKnown RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 ERLIN1O75477 346 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 ONECUT2O95948 504 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 EPB42P16452 691 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 KRT4P19013 534 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 CD22P20273 847 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 ALAS2P22557 587 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 CRHR1P34998 444 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 AHRP35869 848 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 DLSTP36957 453 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 CASP2P42575 452 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 DCDP81605 110 aaKnown RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 ZNF844Q08AG5 666 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 CHIT1Q13231 466 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 DNASE1L3Q13609 305 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 DOC2AQ14183 400 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 E2F2Q14209 437 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 SLBPQ14493 270 aaKnown RBP eCLIP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 TBCCQ15814 346 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 MUM1Q2TAK8 710 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 NKAIN1Q4KMZ8 207 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 XKR6Q5GH73 641 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 METTL2BQ6P1Q9 378 aaKnown RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 CCDC81Q6ZN84 652 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 ASPGQ86U10 573 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 TRABD2AQ86V40 505 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 C4orf33Q8N1A6 199 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 TBC1D19Q8N5T2 526 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 TEX9Q8N6V9 391 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 SLC13A3Q8WWT9 602 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 PTCD3Q96EY7 689 aaKnown RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 SLC45A3Q96JT2 553 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 SLC22A11Q9NSA0 550 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 COPG2Q9UBF2 871 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 NDOR1Q9UHB4 597 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 DCDC2Q9UHG0 476 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 ZFP69BQ9UJL9 534 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 MRPS2Q9Y399 296 aaKnown RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 PCDHGA6Q9Y5G7 932 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 TNPO3Q9Y5L0 923 aaKnown RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 MRPS18BQ9Y676 258 aaKnown RBP11.42□□□□□ -0.58
SSBP3-214ENST00000533209 SEC16AO15027 2179 aa11.42□□□□□ -0.58
SSBP3-214ENST00000533209 K7ENP7 123 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 E2F3O00716 465 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 FOXS1O43638 330 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 DLX3O60479 287 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 CNOT3O75175 753 aaKnown RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 WFS1O76024 890 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 RAB40ALP0C0E4 278 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 AGXTP21549 392 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 CXCR2P25025 360 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 EEF1DP29692 281 aaKnown RBP11.41□□□□□ -0.58
SSBP3-214ENST00000533209 TMPRSS3P57727 454 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 NFKB2Q00653 900 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 IRF8Q02556 426 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 VAC14Q08AM6 782 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 PWP1Q13610 501 aa11.41□□□□□ -0.58
SSBP3-214ENST00000533209 GTF2H2Q13888 395 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms