RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 EZRP15311 586 aaKnown RBP12.28□□□□□ -0.44
COPB1-209ENST00000533096 CD1EP15812 388 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 IL1RNP18510 177 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 PTGER1P34995 402 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 FDFT1P37268 417 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 RFC3P40938 356 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 TERF1P54274 439 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 TAS2R50P59544 299 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 FAM53BQ14153 422 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 CTSL3PQ5NE16 218 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 ZNF468Q5VIY5 522 aaPredicted RBP12.28□□□□□ -0.44
COPB1-209ENST00000533096 ZNF425Q6IV72 752 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 PAPD4Q6PIY7 484 aaKnown RBP12.28□□□□□ -0.44
COPB1-209ENST00000533096 TMEM200AQ86VY9 491 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 RPS19BP1Q86WX3 136 aaKnown RBP12.28□□□□□ -0.44
COPB1-209ENST00000533096 LRRC6Q86X45 466 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 CPSF7Q8N684 471 aaKnown RBP12.28□□□□□ -0.44
COPB1-209ENST00000533096 SLC5A8Q8N695 610 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 ZCCHC10Q8TBK6 192 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 M1APQ8TC57 530 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 C1orf54Q8WWF1 131 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 NRGNQ92686 78 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 ALKBH8Q96BT7 664 aaKnown RBP12.28□□□□□ -0.44
COPB1-209ENST00000533096 SCMH1Q96GD3 660 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 CCDC138Q96M89 665 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 VKORC1Q9BQB6 163 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 TRIM51Q9BSJ1 452 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 LACRTQ9GZZ8 138 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 ZGRF1Q86YA3 2104 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 SVILO95425 2214 aa12.27□□□□□ -0.44
COPB1-209ENST00000533096 A0A1B0GTH9 108 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 ASPDHA6ND91 283 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 E5RI56 91 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 H0YIG0 161 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 PHF2O75151 1096 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 IPO7O95373 1038 aaKnown RBP12.27□□□□□ -0.45
COPB1-209ENST00000533096 SLC16A8O95907 504 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 CATP04040 527 aaKnown RBP12.27□□□□□ -0.45
COPB1-209ENST00000533096 TPOP07202 933 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 PTGS2P35354 604 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 BCL6P41182 706 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 OR4D2P58180 307 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 PTK6Q13882 451 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 EXT1Q16394 746 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 MEI1Q5TIA1 1274 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 FGD2Q7Z6J4 655 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 SIAH3Q8IW03 269 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 KIF2BQ8N4N8 673 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 ARHGEF39Q8N4T4 335 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 ZNF480Q8WV37 535 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 PEX11GQ96HA9 241 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 BIRC8Q96P09 236 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 DMRTA2Q96SC8 542 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 LPAR4Q99677 370 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 EBNA1BP2Q99848 306 aaKnown RBP12.27□□□□□ -0.45
COPB1-209ENST00000533096 ZNF559Q9BR84 538 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 ANKHQ9HCJ1 492 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 MMP25Q9NPA2 562 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 FAM114A2Q9NRY5 505 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 ASB1Q9Y576 335 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 HRH3Q9Y5N1 445 aa12.27□□□□□ -0.45
COPB1-209ENST00000533096 ZNF860A6NHJ4 632 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 USP27XA6NNY8 438 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 ZNF839A8K0R7 811 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 E7ENX8 843 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 MYO1CO00159 1063 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 PSIP1O75475 530 aaKnown RBP12.26□□□□□ -0.45
COPB1-209ENST00000533096 SLC25A12O75746 678 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 NEURL1O76050 574 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 F7P08709 466 aaPredicted RBP12.26□□□□□ -0.45
COPB1-209ENST00000533096 ZNF24P17028 368 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 RPS3P23396 243 aaKnown RBP eCLIP12.26□□□□□ -0.451e-18■■■■■ 65.7
COPB1-209ENST00000533096 HSD17B2P37059 387 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 AGTR2P50052 363 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 ABATP80404 500 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 TAP2Q03519 686 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 KLF1Q13351 362 aaPredicted RBP12.26□□□□□ -0.45
COPB1-209ENST00000533096 KCNJ11Q14654 390 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 ARHGAP19Q14CB8 494 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 ABRAXAS2Q15018 415 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 KCTD19Q17RG1 926 aaPredicted RBP12.26□□□□□ -0.45
COPB1-209ENST00000533096 KRTAP21-3Q3LHN1 58 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 MRNIPQ6NTE8 343 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 CCDC71Q8IV32 467 aaPredicted RBP12.26□□□□□ -0.45
COPB1-209ENST00000533096 REXO1L1PQ8IX06 675 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 EID3Q8N140 333 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 CCDC89Q8N998 374 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 KCT2Q8NC54 265 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 CALR3Q96L12 384 aaKnown RBP12.26□□□□□ -0.45
COPB1-209ENST00000533096 TRIM5Q9C035 493 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 KCNJ16Q9NPI9 418 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 ADGRG4Q8IZF6 3080 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 CNTRLQ7Z7A1 2325 aa12.26□□□□□ -0.45
COPB1-209ENST00000533096 CSMD2Q7Z408 3487 aa12.25□□□□□ -0.45
COPB1-209ENST00000533096 DOCK10Q96BY6 2186 aa12.25□□□□□ -0.45
COPB1-209ENST00000533096 FEZF1A0PJY2 475 aa12.25□□□□□ -0.45
COPB1-209ENST00000533096 A8MUA0 341 aa12.25□□□□□ -0.45
COPB1-209ENST00000533096 PFDN6O15212 129 aa12.25□□□□□ -0.45
COPB1-209ENST00000533096 LIASO43766 372 aa12.25□□□□□ -0.45
COPB1-209ENST00000533096 ZBTB14O43829 449 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms