RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	TAB3	Q8N5C8	712 aa	Predicted RBP	11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	POGLUT1	Q8NBL1	392 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	M1AP	Q8TC57	530 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	FOPNL	Q96NB1	174 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	PANX3	Q96QZ0	392 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	PLCD4	Q9BRC7	762 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	DPH7	Q9BTV6	452 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	VN1R1	Q9GZP7	353 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	C10orf88	Q9H8K7	445 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	KCNK13	Q9HB14	408 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	MMP25	Q9NPA2	562 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	RIMKLB	Q9ULI2	386 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079		V9GYY5	206 aa	Predicted RBP	11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079	CNTRL	Q7Z7A1	2325 aa		11.74	□□□□□ -0.53
CAPN1-223	ENST00000533079		A0A1W2PPV9	198 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	CCDC162P	A2VCL2	907 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	OR51F1	A6NGY5	319 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079		H0YIG0	161 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	FFAR3	O14843	346 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	GPR42	O15529	346 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	PSMD3	O43242	534 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	CEP104	O60308	925 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	NRP2	O60462	931 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	NEURL1	O76050	574 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	CCNDBP1	O95273	360 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	GAS8	O95995	478 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	SP1	P08047	785 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	HOXD4	P09016	255 aa	Predicted RBP	11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	ERG	P11308	486 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	PTPN7	P35236	360 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	AVPR1B	P47901	424 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	RWDD2B	P57060	319 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	PTK6	Q13882	451 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	PARP6	Q2NL67	630 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	HKDC1	Q2TB90	917 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	SPINK14	Q6IE38	97 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	DARS2	Q6PI48	645 aa	Known RBP	11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	MICALCL	Q6ZW33	695 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	PCGF5	Q86SE9	256 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	LINC00523	Q86TU6	105 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	CRLF3	Q8IUI8	442 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	EIF1AD	Q8N9N8	165 aa	Known RBP	11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	OR13J1	Q8NGT2	312 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	FAM57A	Q8TBR7	257 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	PEX13	Q92968	403 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	MS4A14	Q96JA4	679 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	HEMGN	Q9BXL5	484 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	HES7	Q9BYE0	225 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	GOLPH3	Q9H4A6	298 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	GNPTG	Q9UJJ9	305 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	EDAR	Q9UNE0	448 aa		11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.73	□□□□□ -0.53
CAPN1-223	ENST00000533079		A0A0A6YYC8	382 aa	Predicted RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	GABRR3	A8MPY1	467 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079		I3L1I5	382 aa	Predicted RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	FOXS1	O43638	330 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	NME2P1	O60361	137 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	ERLIN1	O75477	346 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	SLC25A12	O75746	678 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	ZWINT	O95229	277 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	GOT2	P00505	430 aa	Known RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	TPH1	P17752	444 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	NME2	P22392	152 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	MARCKSL1	P49006	195 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	EFNA3	P52797	238 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	TAS2R50	P59544	299 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	HSF1	Q00613	529 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	OC90	Q02509	493 aa	Predicted RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	ACVR1	Q04771	509 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	FASTK	Q14296	549 aa	Known RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	SLC25A25	Q6KCM7	469 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	FBXO42	Q6P3S6	717 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	LRRC8B	Q6P9F7	803 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	C3P1	Q6ZMU1	363 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	CD163	Q86VB7	1156 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	PAQR7	Q86WK9	346 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	CLYBL	Q8N0X4	340 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	OR4L1	Q8NH43	312 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	LILRB4	Q8NHJ6	448 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	LKAAEAR1	Q8TD35	194 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	MCOLN3	Q8TDD5	553 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	MAIP1	Q8WWC4	291 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	ALG3	Q92685	438 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	HDAC10	Q969S8	669 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	OR2A5	Q96R48	311 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	CYTH2	Q99418	400 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	TP63	Q9H3D4	680 aa	Predicted RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	MRPS30	Q9NP92	439 aa	Known RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	KCNJ16	Q9NPI9	418 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	DLL4	Q9NR61	685 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	ANKRD10	Q9NXR5	420 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	LRFN1	Q9P244	771 aa		11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	STOX2	Q9P2F5	926 aa	Predicted RBP	11.72	□□□□□ -0.53
CAPN1-223	ENST00000533079	ZNF839	A8K0R7	811 aa		11.71	□□□□□ -0.53
CAPN1-223	ENST00000533079	ERI2	A8K979	691 aa	Known RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms