RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 FAM69BQ5VUD6 431 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 WDR93Q6P2C0 686 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 SLCO4C1Q6ZQN7 724 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 COX15Q7KZN9 410 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 OVCH1Q7RTY7 1134 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 UBLCP1Q8WVY7 318 aaPredicted RBP18.92■□□□□ 0.62
CPSF1-209ENST00000532725 MTBPQ96DY7 904 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 CABS1Q96KC9 395 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 CATSPER2Q96P56 530 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 UBL7Q96S82 380 aaPredicted RBP18.92■□□□□ 0.62
CPSF1-209ENST00000532725 MACROD1Q9BQ69 325 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 CCDC77Q9BR77 488 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 CAPS2Q9BXY5 557 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 CD244Q9BZW8 370 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 GPRC5BQ9NZH0 403 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 ASB1Q9Y576 335 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 ATMQ13315 3056 aa18.92■□□□□ 0.62
CPSF1-209ENST00000532725 SYCE1LA8MT33 242 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 ERVH48-1M5A8F1 160 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 OR1F1O43749 312 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 KLK8O60259 260 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 ALBP02768 609 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 STATHP02808 62 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 S100BP04271 92 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-209ENST00000532725 SHBGP04278 402 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 CD63P08962 238 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 C1GALT1C1LP0DN25 315 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 PIM1P11309 404 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-209ENST00000532725 SCTRP47872 440 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 AGTR2P50052 363 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 SNRPNP63162 240 aaKnown RBP18.91■□□□□ 0.62
CPSF1-209ENST00000532725 CDC16Q13042 620 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 SLC9A5Q14940 896 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 UGT8Q16880 541 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 PRMT9Q6P2P2 845 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 KLC3Q6P597 504 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 METTL27Q8N6F8 245 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-209ENST00000532725 SLC13A3Q8WWT9 602 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 EXTL1Q92935 676 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 EXT2Q93063 718 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 WBP1Q96G27 269 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 ZNF304Q9HCX3 659 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 DNAJC11Q9NVH1 559 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.91■□□□□ 0.621e-7■■■□□ 15
CPSF1-209ENST00000532725 GPN3Q9UHW5 284 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-209ENST00000532725 MAU2Q9Y6X3 613 aa18.91■□□□□ 0.62
CPSF1-209ENST00000532725 V9GYY5 206 aaPredicted RBP18.91■□□□□ 0.62
CPSF1-209ENST00000532725 CDC14CA4D256 554 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 SUPT3HB4E1H0 165 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 FOXS1O43638 330 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 PRAMEF4O60810 478 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 SUPT3HO75486 399 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 ATXN8OSP0DMR3 200 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 VARSP26640 1264 aaKnown RBP18.9■□□□□ 0.62
CPSF1-209ENST00000532725 REEP5Q00765 189 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 IL10RAQ13651 578 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 FAM53BQ14153 422 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 ERCC6LQ2NKX8 1250 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 TECRLQ5HYJ1 363 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 PRAMEF9Q5VWM5 478 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 ATG9BQ674R7 924 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 TMPRSS11BQ86T26 416 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 ASPGQ86U10 573 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 TMEM151BQ8IW70 566 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 CAMKVQ8NCB2 501 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 ADAMTS17Q8TE56 1095 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 UBTD2Q8WUN7 234 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 MVB12AQ96EY5 273 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 BBC3Q96PG8 261 aaPredicted RBP18.9■□□□□ 0.62
CPSF1-209ENST00000532725 AIF1LQ9BQI0 150 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 SLC26A1Q9H2B4 701 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 CDC14AQ9UNH5 594 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 MRPS2Q9Y399 296 aaKnown RBP18.9■□□□□ 0.62
CPSF1-209ENST00000532725 CCDC88CQ9P219 2028 aa18.9■□□□□ 0.62
CPSF1-209ENST00000532725 PIEZO2Q9H5I5 2752 aa18.89■□□□□ 0.62
CPSF1-209ENST00000532725 IQANK1A0A1B0GTG1 560 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 H2AFYO75367 372 aaKnown RBP18.89■□□□□ 0.61
CPSF1-209ENST00000532725 RBP1P09455 135 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 EPORP19235 508 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.61
CPSF1-209ENST00000532725 AHRP35869 848 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 FOXL2P58012 376 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 DEFB109BQ30KR1 87 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 SOWAHCQ53LP3 525 aaPredicted RBP18.89■□□□□ 0.61
CPSF1-209ENST00000532725 TMEM214Q6NUQ4 689 aaKnown RBP18.89■□□□□ 0.61
CPSF1-209ENST00000532725 TMEM151AQ8N4L1 468 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 TBC1D19Q8N5T2 526 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 ANKRD53Q8N9V6 530 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 KCT2Q8NC54 265 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 LSM14AQ8ND56 463 aaKnown RBP18.89■□□□□ 0.61
CPSF1-209ENST00000532725 AENQ8WTP8 325 aaKnown RBP18.89■□□□□ 0.61
CPSF1-209ENST00000532725 MZB1Q8WU39 189 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 COL26A1Q96A83 441 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 FKBP10Q96AY3 582 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 MOCOSQ96EN8 888 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 GEMIN8Q9NWZ8 242 aaKnown RBP18.89■□□□□ 0.61
CPSF1-209ENST00000532725 PSMC3IPQ9P2W1 217 aaPredicted RBP18.89■□□□□ 0.61
CPSF1-209ENST00000532725 ZFP69BQ9UJL9 534 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 PADI2Q9Y2J8 665 aa18.89■□□□□ 0.61
CPSF1-209ENST00000532725 VSTM2BA6NLU5 285 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms