RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 BNIP1Q12981 228 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 CCINQ13939 588 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 CRB2Q5IJ48 1285 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 Q6ZVL8 140 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 TMEM126BQ8IUX1 230 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 IGDCC3Q8IVU1 814 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 OR9A1PQ8NGU1 263 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 GPR174Q9BXC1 333 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 ACTL8Q9H568 366 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 ZDHHC2Q9UIJ5 367 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 NOBOXO60393 691 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 FAM189A2Q15884 450 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 AMIGO1Q86WK6 493 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 PNLDC1Q8NA58 520 aaKnown RBP14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 FCGR1BQ92637 280 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 UFD1Q92890 307 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 SCAMP4Q969E2 229 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 DGCR14Q96DF8 476 aaKnown RBP14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 RBCK1Q9BYM8 510 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 ACTL7AQ9Y615 435 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 CLIC1O00299 241 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 PTGESO14684 152 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 TSPAN6O43657 245 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 CPNE3O75131 537 aaKnown RBP14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 TRMUO75648 421 aaKnown RBP14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 RCBTB2O95199 551 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 HRH2P25021 359 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 C1orf61Q13536 156 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 CBFBQ13951 182 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 OR2M4Q96R27 311 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 MYH11P35749 1972 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 ZNF840PA6NDX5 716 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 LAMTOR5O43504 91 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 FOXN2P32314 431 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 STC1P52823 247 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 RAB8AP61006 207 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 GEMIN6Q8WXD5 167 aaKnown RBP14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 CNDP2Q96KP4 475 aaKnown RBP14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 LGR4Q9BXB1 951 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 RNF11Q9Y3C5 154 aa14.35□□□□□ -0.11
PCDHA9-202ENST00000532602 TNFRSF10BO14763 440 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 MTHFD1P11586 935 aaKnown RBP14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 DEFB103AP81534 67 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 TMEM115Q12893 351 aaPredicted RBP14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 SWI5Q1ZZU3 235 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 ZNF805Q5CZA5 627 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 IQCF2Q8IXL9 164 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 LMO3Q8TAP4 145 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 LRRC46Q96FV0 321 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 HHATLQ9HCP6 504 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 KLHL33A6NCF5 533 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 TEX46H3BTG2 121 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 PGLSO95336 258 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 ZNF3P17036 446 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 GGT5P36269 586 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 GBX2P52951 348 aaPredicted RBP14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 ARF5P84085 180 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 ID2Q02363 134 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 SYT16Q17RD7 645 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 PAMR1Q6UXH9 720 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 ZSCAN1Q8NBB4 408 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 NR4A3Q92570 626 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 DERL2Q9GZP9 239 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 LDAHQ9H6V9 325 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 HCFC1R1Q9NWW0 138 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 LYARQ9NX58 379 aaKnown RBP14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 STC2O76061 302 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 JUNP05412 331 aaKnown RBP14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 EBLN1P0CF75 366 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 PGGT1BP53609 377 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 OR4F6Q8NGB9 312 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 TLCD1Q96CP7 247 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 AKTIPQ9H8T0 292 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 FZD4Q9ULV1 537 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 GRIP1Q9Y3R0 1128 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 FAM159BA6NKW6 160 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 AQP12BA6NM10 295 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 AGTR2P50052 363 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 SLC5A9Q2M3M2 681 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 PLEKHS1Q5SXH7 462 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 ZC3HC1Q86WB0 502 aaKnown RBP14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 AQP12AQ8IXF9 295 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 WDR92Q96MX6 357 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 WDR6Q9NNW5 1121 aaKnown RBP14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 NLE1Q9NVX2 485 aaPredicted RBP14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 PDE10AQ9Y233 779 aa14.34□□□□□ -0.11
PCDHA9-202ENST00000532602 LCHNA4D1U4 455 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 SAGE2PA6NJ88 616 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 SNX4O95219 450 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 AHSA1O95433 338 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 EPCAMP16422 314 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 BMPR1AP36894 532 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 RNF144AP50876 292 aaPredicted RBP14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 ADAM8P78325 824 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 DPY19L3Q6ZPD9 716 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 UTS2BQ765I0 119 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 ARHGAP22Q7Z5H3 698 aa14.33□□□□□ -0.11
PCDHA9-202ENST00000532602 P2RY8Q86VZ1 359 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms