RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 LYARQ9NX58 379 aaKnown RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 CPNE7Q9UBL6 633 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 RREB1Q92766 1687 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 CAPN5O15484 640 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 CXCR1P25024 350 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 MTTPP55157 894 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 MAZP56270 477 aaKnown RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 UNC5DQ6UXZ4 953 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 SHISA6Q6ZSJ9 500 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 CCDC116Q8IYX3 515 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 DHRSXQ8N5I4 330 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 WDR36Q8NI36 951 aaKnown RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 OLFM1Q99784 485 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 ELL3Q9HB65 397 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 ARL8BQ9NVJ2 186 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 SLC39A1Q9NY26 324 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 ZDHHC2Q9UIJ5 367 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 IKZF3Q9UKT9 509 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 ELOA3DA6NLF2 546 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 PRRT4C9JH25 899 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 SLC26A3P40879 764 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 CCR10P46092 362 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 KCNC1P48547 511 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 PGFP49763 221 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 XKP51811 444 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 DGKQP52824 942 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 GSTM4Q03013 218 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 SLAMF1Q13291 335 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 HERC3Q15034 1050 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 NSDHLQ15738 373 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 DPY19L1Q2PZI1 675 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 ELOA3BQ3SY89 546 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 KDELC1Q6UW63 502 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 ISLR2Q6UXK2 745 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 NUP54Q7Z3B4 507 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 ELOA3Q8NG57 546 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 RIT1Q92963 219 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 THAP11Q96EK4 314 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 SH3YL1Q96HL8 342 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 NSUN5Q96P11 429 aaKnown RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 KCNC2Q96PR1 638 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 C6orf106Q9H6K1 298 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 RPRD1BQ9NQG5 326 aaKnown RBP7.69□□□□□ -1.18
CTNND1-230ENST00000532245 ACTR10Q9NZ32 417 aa7.69□□□□□ -1.18
CTNND1-230ENST00000532245 KIR2DS5A0A0G2JLQ3 304 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 A0A0G2JNG1 304 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 SLC9B1P1A6NJY1 282 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 KIR2DS3K7RE56 304 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 RTCAO00442 366 aaKnown RBP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 HOXC11O43248 304 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 KIF1CO43896 1103 aaKnown RBP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 SLC16A8O95907 504 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 IFNGP01579 166 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 RNH1P13489 461 aaKnown RBP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 ACSL1P33121 698 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 CSNK1DP48730 415 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 TOP3AQ13472 1001 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 TUBB3Q13509 450 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 KIR2DS5Q14953 304 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 C18orf21Q32NC0 220 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 CATSPEREQ5SY80 951 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 CDC73Q6P1J9 531 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 OR4N5Q8IXE1 308 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 CEP76Q8TAP6 659 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 SDHAF3Q9NRP4 125 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 WNK3Q9BYP7 1800 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 C1SP09871 688 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 TSPAN19P0C672 248 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 NCK1P16333 377 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 KLC1Q07866 573 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 GALNT18Q6P9A2 607 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 NRROSQ86YC3 692 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 RNF168Q8IYW5 571 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 GIMAP2Q9UG22 337 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 GMPPBQ9Y5P6 360 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 EVPLQ92817 2033 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 STX16-NPEPL1H3BU86 382 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 STX16O14662 325 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 MBTPS2O43462 519 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 MT-ND1P03886 318 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 HBQ1P09105 142 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 CD9P21926 228 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 GRK6P43250 576 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 LGALS3BPQ08380 585 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 RPA4Q13156 261 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 ZNF678Q5SXM1 525 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 NXPE4Q6UWF7 544 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 TMEM135Q86UB9 458 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 SFRP1Q8N474 314 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 OR13H1Q8NG92 308 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 OR52E1Q8NGJ3 308 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 TMEM174Q8WUU8 243 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 COL21A1Q96P44 957 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 EBF4Q9BQW3 602 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 ARRDC1-AS1Q9H2J1 176 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 SPATA7Q9P0W8 599 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 CDC40O60508 579 aaKnown RBP eCLIP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 UNC5CO95185 931 aa7.68□□□□□ -1.18
CTNND1-230ENST00000532245 RNF144AP50876 292 aaPredicted RBP7.68□□□□□ -1.18
CTNND1-230ENST00000532245 RACK1P63244 317 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms