RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 GFERP55789 205 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 SRSF11Q05519 484 aaKnown RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 PRKAA1Q13131 559 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CTBP1Q13363 440 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CRYMQ14894 314 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ADRM1Q16186 407 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 WHAMMP3Q1A5X7 153 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 HSP90AA5PQ58FG0 334 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 SPANXN3Q5MJ09 141 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CTSL3PQ5NE16 218 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 DNTTIP2Q5QJE6 756 aaKnown RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 IRGCQ6NXR0 463 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 BORAQ6PGQ7 559 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 C1orf229Q6ZS94 237 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 FAM92BQ6ZTR7 304 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CENPUQ71F23 418 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 OTOAQ7RTW8 1153 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 GALNTL5Q7Z4T8 443 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ARHGAP22Q7Z5H3 698 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CLEC14AQ86T13 490 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 KCNMB4Q86W47 210 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 AMIGO1Q86WK6 493 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 OOSP2Q86WS3 158 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 DENND6AQ8IWF6 608 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 SLC22A15Q8IZD6 547 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZNF248Q8NDW4 579 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 TOR1AIP2Q8NFQ8 470 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 OR4E2Q8NGC2 313 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 OR8H1Q8NGG4 311 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 LKAAEAR1Q8TD35 194 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 SKA2Q8WVK7 121 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 IPCEF1Q8WWN9 437 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ST8SIA4Q92187 359 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 RSC1A1Q92681 617 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 LRRC39Q96DD0 335 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 C9orf72Q96LT7 481 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 PWWP2AQ96N64 755 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 BIRC8Q96P09 236 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ERP44Q9BS26 406 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 HGH1Q9BTY7 390 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 RAB33BQ9H082 229 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 RAB17Q9H0T7 212 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 DPH5Q9H2P9 285 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 SRMSQ9H3Y6 488 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 POFUT1Q9H488 388 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 TFB2MQ9H5Q4 396 aaKnown RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 PPANQ9NQ55 473 aaKnown RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 HRASLS2Q9NWW9 162 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 SLC39A1Q9NY26 324 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 EPHA6Q9UF33 1036 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZC3H7BQ9UGR2 993 aaKnown RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 CHMP2BQ9UQN3 213 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ASF1AQ9Y294 204 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 TMEM5Q9Y2B1 443 aa5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 UTP11Q9Y3A2 253 aaKnown RBP5.59□□□□□ -1.51
HMGB1P42-201ENST00000532126 ZNF106Q9H2Y7 1883 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 A0A087WV48 116 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 GSAPA4D1B5 854 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CLCA1A8K7I4 914 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 C2orf74A8MZ97 194 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 C9orf172C9J069 976 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 E5RI56 91 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 GTPBP1O00178 669 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 MATN2O00339 956 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 TP73O15350 636 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 NVLO15381 856 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 KLK10O43240 276 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 KIF1CO43896 1103 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 PRAMEF10O60809 474 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 NIPSNAP2O75323 286 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 GPC4O75487 556 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 HAUS5O94927 633 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 SLCO2B1O94956 709 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ERVK-10P10266 1014 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 FGF3P11487 239 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 NID1P14543 1247 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 PKMP14618 531 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CTSSP25774 331 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 SLC5A2P31639 672 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 SHMT2P34897 504 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 EIF2S3P41091 472 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ETV5P41161 510 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CARSP49589 748 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CAV1Q03135 178 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ABRQ12979 859 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 PDIA2Q13087 525 aaKnown RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 IL10RAQ13651 578 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 TUBB2AQ13885 445 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 RASA2Q15283 850 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZNF789Q5FWF6 425 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 DCAF12Q5T6F0 453 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CACHD1Q5VU97 1274 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ANKS6Q68DC2 871 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 C8orf74Q6P047 294 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 TTC23LQ6PF05 361 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 UNC5DQ6UXZ4 953 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 CYP2R1Q6VVX0 501 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ACAD11Q709F0 780 aa5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZNF572Q7Z3I7 529 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P42-201ENST00000532126 PRSS42Q7Z5A4 293 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms