RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 IL1RNP18510 177 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 PAMP19021 973 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 IMPA1P29218 277 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 AP2B1P63010 937 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 RELAQ04206 551 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 BTBD16Q32M84 506 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 TTLL9Q3SXZ7 439 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 ZNF766Q5HY98 468 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 CPEB2Q7Z5Q1 589 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 CAND1Q86VP6 1230 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 GAS2L3Q86XJ1 694 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 BEST3Q8N1M1 668 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 FBXO15Q8NCQ5 510 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 ZNF669Q96BR6 464 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 EBNA1BP2Q99848 306 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 SH2B3Q9UQQ2 575 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 ZKSCAN5Q9Y2L8 839 aa17.41■□□□□ 0.38
SSSCA1-206ENST00000531405 H0YIG0 161 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 GFYI3L273 518 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 SGK494L7N484 410 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 NSA2O95478 260 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 MPC1LP0DKB6 136 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 HTR1EP28566 365 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 SKIV2L2P42285 1042 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 XCR1P46094 333 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 GPS1Q13098 491 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 DHX34Q14147 1143 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 CYHR1Q6ZMK1 362 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 BNC2Q6ZN30 1099 aaPredicted RBP17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 PIWIL4Q7Z3Z4 852 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 ZNF808Q8N4W9 903 aaPredicted RBP17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 OR51Q1Q8NH59 317 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 ZCCHC10Q8TBK6 192 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 SIGLEC12Q96PQ1 595 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 GPR21Q99679 349 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 HES7Q9BYE0 225 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 RUBCNLQ9H714 662 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 ANKRD10Q9NXR5 420 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 SAMD15Q9P1V8 674 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 TEKT2Q9UIF3 430 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 VPS9D1Q9Y2B5 631 aa17.4■□□□□ 0.38
SSSCA1-206ENST00000531405 MAN1A2O60476 641 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 CXCR5P32302 372 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 TBPL1P62380 186 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 RBPJQ06330 500 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 LONRF1Q17RB8 773 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 ACER2Q5QJU3 275 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 PLAG1Q6DJT9 500 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 UBE2R2Q712K3 238 aaPredicted RBP17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 ANKRD37Q7Z713 158 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 CPNE9Q8IYJ1 553 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 CD200R1Q8TD46 325 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 CCDC138Q96M89 665 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 NPAS2Q99743 824 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 RBCK1Q9BYM8 510 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 TSPAN10Q9H1Z9 355 aaPredicted RBP17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 CCDC68Q9H2F9 335 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 LZTFL1Q9NQ48 299 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 KLHL1Q9NR64 748 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 TMEM184CQ9NVA4 438 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 TINAGQ9UJW2 476 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 HIVEP1P15822 2718 aa17.39■□□□□ 0.37
SSSCA1-206ENST00000531405 FAM237BA0A1B0GVD1 139 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 FEZF1A0PJY2 475 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 FAM227AF5H4B4 570 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 GOLGA8MH3BSY2 632 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 ZBTB14O43829 449 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 KIF5CO60282 957 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 CEP104O60308 925 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 SLC19A2O60779 497 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 MYBL2P10244 700 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 CDC25BP30305 580 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 COILP38432 576 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 SLC1A2P43004 574 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 RPS15AP62244 130 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 SARNPP82979 210 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 ADORA2A-AS1P86434 159 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 TUBA3CQ13748 450 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 THOC5Q13769 683 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 C3AR1Q16581 482 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 ZNF630Q2M218 657 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 TMEM214Q6NUQ4 689 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 H3F3CQ6NXT2 135 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 TUBA3EQ6PEY2 450 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 MBOAT1Q6ZNC8 495 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 PDSS2Q86YH6 399 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 CRLF3Q8IUI8 442 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 KCT2Q8NC54 265 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 MAIP1Q8WWC4 291 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 KCNJ9Q92806 393 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 KCNK13Q9HB14 408 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 CCDC177Q9NQR7 707 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 C19orf25Q9UFG5 118 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 DHRS7Q9Y394 339 aa17.38■□□□□ 0.37
SSSCA1-206ENST00000531405 C2CD3Q4AC94 2353 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 ZCWPW2A0A1B0GU75 182 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 RDH16O75452 317 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 ENO3P13929 434 aaPredicted RBP17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 BCL6P41182 706 aa17.37■□□□□ 0.37
SSSCA1-206ENST00000531405 MAGEA6P43360 314 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms