RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ULK4Q96C45 1275 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 PHF21BQ96EK2 531 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 ARL5BQ96KC2 179 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 PPP1R2P1Q96PQ5 205 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 VAT1Q99536 393 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 MED18Q9BUE0 208 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 PPP1R3EQ9H7J1 279 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 GALNT9Q9HCQ5 603 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 CATSPERZQ9NTU4 200 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 SLCO1C1Q9NYB5 712 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 SEC14L4Q9UDX3 406 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 DPP7Q9UHL4 492 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 CYB5R1Q9UHQ9 305 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 PURGQ9UJV8 347 aaKnown RBP7.88□□□□□ -1.15
CSDE1-214ENST00000530886 MKL2Q9ULH7 1088 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 PCDHA10Q9Y5I2 948 aa7.88□□□□□ -1.15
CSDE1-214ENST00000530886 PATJQ8NI35 1801 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 TRPM7Q96QT4 1865 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 IGKV6D-21A0A0A0MT36 114 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 SLC7A4O43246 635 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ONECUT3O60422 494 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CREG1O75629 220 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ANXA3P12429 323 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 GOT1P17174 413 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 NFKB1P19838 968 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 HNF1BP35680 557 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CAP2P40123 477 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CD96P40200 585 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 GZMMP51124 257 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ATP12AP54707 1039 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 RPA4Q13156 261 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ATG9BQ674R7 924 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 KIAA0930Q6ICG6 404 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 KLHL17Q6TDP4 642 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 EIF3MQ7L2H7 374 aaKnown RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 KRT74Q7RTS7 529 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 KDELC2Q7Z4H8 507 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 DENND6AQ8IWF6 608 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CAMKK1Q8N5S9 505 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 DNAJB8Q8NHS0 232 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF419Q96HQ0 510 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF599Q96NL3 588 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 TAAR1Q96RJ0 339 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 MGLLQ99685 303 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 BARD1Q99728 777 aaKnown RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 DPCDQ9BVM2 203 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 C1QTNF3Q9BXJ4 246 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF436Q9C0F3 470 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ESRP2Q9H6T0 727 aaKnown RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 GAREM1Q9H706 876 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 NMUR1Q9HB89 426 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 KRT84Q9NSB2 600 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 TREX1Q9NSU2 369 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CTSFQ9UBX1 484 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PCOLCE2Q9UKZ9 415 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 FZD10Q9ULW2 581 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 NDRG2Q9UN36 371 aaKnown RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 MAFBQ9Y5Q3 323 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 MCM3APO60318 1980 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 HYKKA2RU49 373 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ASB14A6NK59 587 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 E9PAM4 449 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 INMT-MINDY4F8WBC2 141 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 FZD9O00144 591 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PIPP12273 146 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 MAPK1P28482 360 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CHRNA5P30532 468 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 BAG6P46379 1132 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 CLCN4P51793 760 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 FGFBP1Q14512 234 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 INTS6LQ5JSJ4 861 aaKnown RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 MCATQ8IVS2 390 aaKnown RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PYROXD2Q8N2H3 581 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 OR8D4Q8NGM9 314 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 OR52N1Q8NH53 320 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 NXPE2Q96DL1 559 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 SCMH1Q96GD3 660 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 APOL2Q9BQE5 337 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 TMEM43Q9BTV4 400 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ABCG4Q9H172 646 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PIF1Q9H611 641 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ABCB9Q9NP78 766 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PXMP2Q9NR77 195 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 SDHAF3Q9NRP4 125 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PIM2Q9P1W9 311 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 KLHL8Q9P2G9 620 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 KIAA1671Q9BY89 1806 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 GLYATL1P3A0A0U1RQE8 302 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 FAM240BA0A1B0GVZ2 78 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 MMP20O60882 483 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 HMBSP08397 361 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 LINC00032P0C843 101 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF37AP17032 561 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-214ENST00000530886 PTPRAP18433 802 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 SOX11P35716 441 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 SNX16P57768 344 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 DAB2P98082 770 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 DHODHQ02127 395 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 FGL1Q08830 312 aa7.87□□□□□ -1.15
CSDE1-214ENST00000530886 LCP2Q13094 533 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms