RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 LDB1Q86U70 411 aaPredicted RBP11.58□□□□□ -0.56
SRPRA-202ENST00000527817 TMEM200AQ86VY9 491 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 LRRC6Q86X45 466 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 MARVELD2Q8N4S9 558 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 TAB3Q8N5C8 712 aaPredicted RBP11.58□□□□□ -0.56
SRPRA-202ENST00000527817 SLC5A8Q8N695 610 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 POGLUT1Q8NBL1 392 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 PLPP5Q8NEB5 264 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 OR9A4Q8NGU2 314 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 OR51Q1Q8NH59 317 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 MCOLN3Q8TDD5 553 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 UCK2Q9BZX2 261 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 CDCP1Q9H5V8 836 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 TRIM45Q9H8W5 580 aaPredicted RBP11.58□□□□□ -0.56
SRPRA-202ENST00000527817 GNPTGQ9UJJ9 305 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 RNF6Q9Y252 685 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 DNAJC13O75165 2243 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 NKX2-6A6NCS4 301 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 P2RX6O15547 441 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 MFAP3LO75121 409 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 SLC25A12O75746 678 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 CCNDBP1O95273 360 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 PTGER1P34995 402 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 RWDD2BP57060 319 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 TAS2R50P59544 299 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 PPP2R2AP63151 447 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 ABATP80404 500 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 ACTN3Q08043 901 aaPredicted RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 GBX1Q14549 363 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 MFSD4BQ5TF39 518 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 ZNF468Q5VIY5 522 aaPredicted RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 PAPD4Q6PIY7 484 aaKnown RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 RPS19BP1Q86WX3 136 aaKnown RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 ZNF227Q86WZ6 799 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 CPSF7Q8N684 471 aaKnown RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 RND1Q92730 232 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 LPAR4Q99677 370 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 CATSPERZQ9NTU4 200 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 CCM2LQ9NUG4 571 aaPredicted RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 MARCH4Q9P2E8 410 aaPredicted RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 PCYOX1Q9UHG3 505 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 RUVBL2Q9Y230 463 aaKnown RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 R3HDM2Q9Y2K5 976 aaKnown RBP11.57□□□□□ -0.56
SRPRA-202ENST00000527817 GTF3C3Q9Y5Q9 886 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 SCN3AQ9NY46 2000 aa11.57□□□□□ -0.56
SRPRA-202ENST00000527817 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
SRPRA-202ENST00000527817 KCNE1BA0A087WTH5 132 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 A0A1B0GTH9 108 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 OR2W5A6NFC9 320 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 USP27XA6NNY8 438 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 ZNF839A8K0R7 811 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 MYO1CO00159 1063 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 NDC80O14777 642 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 CD3EAPO15446 510 aaKnown RBP11.56□□□□□ -0.56
SRPRA-202ENST00000527817 TPOP07202 933 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 ATP5DP30049 168 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 BCL6P41182 706 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 XCR1P46094 333 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 CYB561P49447 251 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 GDF10P55107 478 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 SNRPNP63162 240 aaKnown RBP11.56□□□□□ -0.56
SRPRA-202ENST00000527817 NSDHLQ15738 373 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 SFT2D3Q587I9 215 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 AADACL2Q6P093 401 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 CD163Q86VB7 1156 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 SHISA5Q8N114 240 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 ELP5Q8TE02 316 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 NRGNQ92686 78 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 CALR3Q96L12 384 aaKnown RBP11.56□□□□□ -0.56
SRPRA-202ENST00000527817 EBNA1BP2Q99848 306 aaKnown RBP11.56□□□□□ -0.56
SRPRA-202ENST00000527817 TP63Q9H3D4 680 aaPredicted RBP11.56□□□□□ -0.56
SRPRA-202ENST00000527817 GSX1Q9H4S2 264 aaPredicted RBP11.56□□□□□ -0.56
SRPRA-202ENST00000527817 DLL4Q9NR61 685 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 TAC3Q9UHF0 121 aa11.56□□□□□ -0.56
SRPRA-202ENST00000527817 PHF3Q92576 2039 aaKnown RBP11.55□□□□□ -0.56
SRPRA-202ENST00000527817 ZNF407Q9C0G0 2248 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 GOLGA6L9A6NEM1 432 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 E7ENX8 843 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 HAT1O14929 419 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 CBFA2T2O43439 604 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 KLK8O60259 260 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 PSIP1O75475 530 aaKnown RBP11.55□□□□□ -0.56
SRPRA-202ENST00000527817 NDUFS3O75489 264 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 ZWINTO95229 277 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 DRD2P14416 443 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 IL10P22301 178 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 TRHRP34981 398 aaPredicted RBP11.55□□□□□ -0.56
SRPRA-202ENST00000527817 GRIA1P42261 906 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 PNLIPRP1P54315 467 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 MPP1Q00013 466 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 RHAGQ02094 409 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 TAP2Q03519 686 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 USP10Q14694 798 aaKnown RBP11.55□□□□□ -0.56
SRPRA-202ENST00000527817 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.55□□□□□ -0.56
SRPRA-202ENST00000527817 PPP1R21Q6ZMI0 780 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 ACAD11Q709F0 780 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 PRSS41Q7RTY9 318 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 VSTM4Q8IW00 320 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 CLYBLQ8N0X4 340 aa11.55□□□□□ -0.56
SRPRA-202ENST00000527817 MPP5Q8N3R9 675 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms