RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 HSPA7P48741 367 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 RPS15P62841 145 aaKnown RBP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 CXADRP78310 365 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 PWP1Q13610 501 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 NCF4Q15080 339 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 PCBP2Q15366 365 aaKnown RBP eCLIP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 TBCCQ15814 346 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 PDK4Q16654 411 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 C18orf21Q32NC0 220 aaPredicted RBP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 CATSPEREQ5SY80 951 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 FAM199XQ6PEV8 388 aaPredicted RBP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 SYVN1Q86TM6 617 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 CAMKVQ8NCB2 501 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 STARD8Q92502 1023 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 ROPN1BQ9BZX4 212 aaPredicted RBP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 MRPL46Q9H2W6 279 aaKnown RBP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 WDR54Q9H977 334 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 ROPN1Q9HAT0 212 aaPredicted RBP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 IL17BQ9UHF5 180 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 RUVBL1Q9Y265 456 aaKnown RBP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 TNPO3Q9Y5L0 923 aaKnown RBP16.46■□□□□ 0.23
LMX1B-203ENST00000526117 MGAQ8IWI9 3026 aa16.46■□□□□ 0.23
LMX1B-203ENST00000526117 STX16-NPEPL1H3BU86 382 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 STX16O14662 325 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 P2RX6O15547 441 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 LCMT2O60294 686 aaKnown RBP16.45■□□□□ 0.22
LMX1B-203ENST00000526117 EPORP19235 508 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 NDUFA9Q16795 377 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 HKDC1Q2TB90 917 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 LCN10Q6JVE6 187 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 TMEM214Q6NUQ4 689 aaKnown RBP16.45■□□□□ 0.22
LMX1B-203ENST00000526117 MRPL14Q6P1L8 145 aaKnown RBP16.45■□□□□ 0.22
LMX1B-203ENST00000526117 C19orf48Q6RUI8 117 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 SH2D5Q6ZV89 423 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 TTLL10Q6ZVT0 673 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 TMPRSS11BQ86T26 416 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 PLD3Q8IV08 490 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 TMEM151AQ8N4L1 468 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 TTLQ8NG68 377 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 NT5CQ8TCD5 201 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 PTCD3Q96EY7 689 aaKnown RBP16.45■□□□□ 0.22
LMX1B-203ENST00000526117 CATSPER2Q96P56 530 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 TMEM109Q9BVC6 243 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 ACTL8Q9H568 366 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 XPR1Q9UBH6 696 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 OPTCQ9UBM4 332 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 ZFP69BQ9UJL9 534 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 CDC14AQ9UNH5 594 aa16.45■□□□□ 0.22
LMX1B-203ENST00000526117 FARSAQ9Y285 508 aaKnown RBP16.45■□□□□ 0.22
LMX1B-203ENST00000526117 MDC1Q14676 2089 aaKnown RBP16.44■□□□□ 0.22
LMX1B-203ENST00000526117 FEZF1A0PJY2 475 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 CLGNO14967 610 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 PRPF4O43172 522 aaKnown RBP eCLIP16.44■□□□□ 0.22
LMX1B-203ENST00000526117 CREG1O75629 220 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 MED26O95402 600 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 EIF2S1P05198 315 aaKnown RBP16.44■□□□□ 0.22
LMX1B-203ENST00000526117 SLC35G6P0C7Q6 338 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 PIK3CGP48736 1102 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 NFKB2Q00653 900 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 RHDQ02161 417 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 LAPTM5Q13571 262 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 ARHGAP40Q5TG30 622 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 OVCH1Q7RTY7 1134 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 ASPGQ86U10 573 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 TRPV3Q8NET8 790 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 EXT2Q93063 718 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 NACC2Q96BF6 587 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 CRELD1Q96HD1 420 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 EFCAB11Q9BUY7 163 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 DRC3Q9H069 523 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 SPNS1Q9H2V7 528 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 SLC22A11Q9NSA0 550 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 STARD5Q9NSY2 213 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 ZNF358Q9NW07 568 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 LGALS13Q9UHV8 139 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 TCFL5Q9UL49 500 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 PADI2Q9Y2J8 665 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 ASB1Q9Y576 335 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 SLC22A7Q9Y694 548 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 FER1L5A0AVI2 2057 aa16.44■□□□□ 0.22
LMX1B-203ENST00000526117 SPTBP11277 2137 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 IGLV3-12A0A075B6K2 115 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 OR1F1O43749 312 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 CCNT2O60583 730 aaKnown RBP16.43■□□□□ 0.22
LMX1B-203ENST00000526117 UGDHO60701 494 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 H2AFYO75367 372 aaKnown RBP16.43■□□□□ 0.22
LMX1B-203ENST00000526117 KLF7O75840 302 aaPredicted RBP16.43■□□□□ 0.22
LMX1B-203ENST00000526117 WFS1O76024 890 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 GFAPP14136 432 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 EPB42P16452 691 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 ALAS2P22557 587 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 AGTR2P50052 363 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 CDC20Q12834 499 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 DSG2Q14126 1118 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 PFKFB4Q16877 469 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 UGT8Q16880 541 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 C1orf189Q5VU69 101 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 NIPAL1Q6NVV3 410 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 COX15Q7KZN9 410 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 KRT78Q8N1N4 520 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms