RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SCTRP47872 440 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 HSPA7P48741 367 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 ALDH18A1P54886 795 aaKnown RBP11.97□□□□□ -0.49
VEGFA-225ENST00000523950 SETDB1Q15047 1291 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 PDK4Q16654 411 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 CATSPEREQ5SY80 951 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 C1orf189Q5VU69 101 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 ATG9BQ674R7 924 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 NIPAL1Q6NVV3 410 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 VN1R4Q7Z5H5 301 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 ASPGQ86U10 573 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 PLD3Q8IV08 490 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 ENDOVQ8N8Q3 282 aaKnown RBP11.97□□□□□ -0.49
VEGFA-225ENST00000523950 TTLQ8NG68 377 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 AENQ8WTP8 325 aaKnown RBP11.97□□□□□ -0.49
VEGFA-225ENST00000523950 EXT2Q93063 718 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 CAVIN3Q969G5 261 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 TM4SF19Q96DZ7 209 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 WDR34Q96EX3 536 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 C10orf90Q96M02 699 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 UBL7Q96S82 380 aaPredicted RBP11.97□□□□□ -0.49
VEGFA-225ENST00000523950 CD244Q9BZW8 370 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 SLC26A1Q9H2B4 701 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 WDR54Q9H977 334 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 STARD5Q9NSY2 213 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 COPG2Q9UBF2 871 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 NXT1Q9UKK6 140 aaKnown RBP11.97□□□□□ -0.49
VEGFA-225ENST00000523950 TCFL5Q9UL49 500 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 TNPO3Q9Y5L0 923 aaKnown RBP11.97□□□□□ -0.49
VEGFA-225ENST00000523950 PKD1L2Q7Z442 2459 aa11.97□□□□□ -0.49
VEGFA-225ENST00000523950 CELSR3Q9NYQ7 3312 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 K7EPI3 171 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 UBXN8O00124 270 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 MAP2K7O14733 419 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 CDH16O75309 829 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 NUDT17P0C025 328 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 GFAPP14136 432 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 H2AFXP16104 143 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-225ENST00000523950 HSD17B3P37058 310 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 BCL6P41182 706 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 GDF5P43026 501 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 GLRBP48167 497 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 KCNC1P48547 511 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 PIK3CGP48736 1102 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 GABPB1Q06547 395 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-225ENST00000523950 PCDH1Q08174 1060 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 LAPTM5Q13571 262 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 PWP1Q13610 501 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 NAA30Q147X3 362 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-225ENST00000523950 UGT8Q16880 541 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 ERCC6LQ2NKX8 1250 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 HKDC1Q2TB90 917 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 LCN10Q6JVE6 187 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 MRPL14Q6P1L8 145 aaKnown RBP11.96□□□□□ -0.49
VEGFA-225ENST00000523950 SLCO4C1Q6ZQN7 724 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 OVCH1Q7RTY7 1134 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 KRT78Q8N1N4 520 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 PLD6Q8N2A8 252 aaKnown RBP11.96□□□□□ -0.49
VEGFA-225ENST00000523950 RIBC1Q8N443 379 aaPredicted RBP11.96□□□□□ -0.49
VEGFA-225ENST00000523950 ARHGEF39Q8N4T4 335 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 TRPV3Q8NET8 790 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 THAP4Q8WY91 577 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 MRPL57Q9BQC6 102 aaKnown RBP11.96□□□□□ -0.49
VEGFA-225ENST00000523950 EFCAB11Q9BUY7 163 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 DRC3Q9H069 523 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 NT5DC2Q9H857 520 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 SYNPO2LQ9H987 977 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 ZNF304Q9HCX3 659 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 OPTCQ9UBM4 332 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 ZFP69BQ9UJL9 534 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 RAB21Q9UL25 225 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 POLHQ9Y253 713 aa11.96□□□□□ -0.49
VEGFA-225ENST00000523950 MRPS18BQ9Y676 258 aaKnown RBP11.96□□□□□ -0.49
VEGFA-225ENST00000523950 SEC16AO15027 2179 aa11.96□□□□□ -0.5
VEGFA-225ENST00000523950 FEZF1A0PJY2 475 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 URADA6NGE7 173 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 H0YIG0 161 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 NKX2-8O15522 239 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 P2RX6O15547 441 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 OR1F1O43749 312 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 LCMT2O60294 686 aaKnown RBP11.95□□□□□ -0.5
VEGFA-225ENST00000523950 CCNT2O60583 730 aaKnown RBP11.95□□□□□ -0.5
VEGFA-225ENST00000523950 SMIM24O75264 130 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 SHBGP04278 402 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 GSTA1P08263 222 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 ITGAXP20702 1163 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 HPDP32754 393 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-225ENST00000523950 FOLR3P41439 243 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 AVPR1BP47901 424 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 SKP1P63208 163 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 RGS1Q08116 209 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 DSG2Q14126 1118 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 E2F2Q14209 437 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 PCBP2Q15366 365 aaKnown RBP eCLIP11.95□□□□□ -0.51e-10■■□□□ 11.4
VEGFA-225ENST00000523950 TBCCQ15814 346 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 C18orf21Q32NC0 220 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-225ENST00000523950 PAGE2BQ5JRK9 111 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 MLIPQ5VWP3 458 aa11.95□□□□□ -0.5
VEGFA-225ENST00000523950 TMEM214Q6NUQ4 689 aaKnown RBP11.95□□□□□ -0.5
VEGFA-225ENST00000523950 C16orf46Q6P387 395 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms