RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 HIST2H2BCQ6DN03 193 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 NIPAL1Q6NVV3 410 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 GALNT7Q86SF2 657 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 ASPGQ86U10 573 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 PLD3Q8IV08 490 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 ZC3H7AQ8IWR0 971 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 CNTN4Q8IWV2 1026 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 LRRC56Q8IYG6 542 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 AMER3Q8N944 861 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 GPATCH11Q8N954 259 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 BRIX1Q8TDN6 353 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 SLCO2A1Q92959 643 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 ALKBH8Q96BT7 664 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 CERS2Q96G23 380 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 TUBB6Q9BUF5 446 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.41□□□□□ -1.062e-8■■■□□ 15.5
CTNNA1-240ENST00000523912 ZBTB20Q9HC78 741 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 OLAHQ9NV23 265 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 ARL15Q9NXU5 204 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 ABI3Q9P2A4 366 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 PTGFRNQ9P2B2 879 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 ITPR2Q14571 2701 aa8.41□□□□□ -1.06
CTNNA1-240ENST00000523912 LOC102723996A0A087X1L8 192 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 A1L4Q6 167 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 FFAR3O14843 346 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 GPR42O15529 346 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 ENO2P09104 434 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 IL10P22301 178 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 SOX11P35716 441 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 AGTR2P50052 363 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 ARL4CP56559 192 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 MAT1AQ00266 395 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 DR1Q01658 176 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 Q0VFX4 171 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 ILF2Q12905 390 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 NAE1Q13564 534 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 HERC3Q15034 1050 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 ABHD17BQ5VST6 288 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 FAAH2Q6GMR7 532 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 FAM45BPQ6NSW5 357 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 AGTRAPQ6RW13 159 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 LCTLQ6UWM7 567 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 CYHR1Q6ZMK1 362 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 TMEM151BQ8IW70 566 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 AGGF1Q8N302 714 aaeCLIP8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 SIRT6Q8N6T7 355 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 OR1N1Q8NGS0 311 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 OR9A4Q8NGU2 314 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 ZCCHC10Q8TBK6 192 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 FAM45AQ8TCE6 357 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 GRHL3Q8TE85 626 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 EEF1AKMT1Q8WVE0 214 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 FAR1Q8WVX9 515 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 SLC13A3Q8WWT9 602 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 LRRC39Q96DD0 335 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 CFAP36Q96G28 342 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 BARD1Q99728 777 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 RNF32Q9H0A6 362 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 ZNF700Q9H0M5 742 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 DDX47Q9H0S4 455 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 ATG10Q9H0Y0 220 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 PDE10AQ9Y233 779 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 PCM1Q15154 2024 aa8.4□□□□□ -1.06
CTNNA1-240ENST00000523912 DIDO1Q9BTC0 2240 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 ABCA12Q86UK0 2595 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 PCSK5Q92824 1860 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 NDUFS4O43181 175 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 FOXS1O43638 330 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 CRYABP02511 175 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 STATHP02808 62 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 CDH1P12830 882 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 IL1RNP18510 177 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 JAK1P23458 1154 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 DCTP40126 519 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 BCL6P41182 706 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 XCR1P46094 333 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 CDKN2DP55273 166 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 CSNK1G2P78368 415 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 RGS1Q08116 209 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 FRG1Q14331 258 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 PCOLCEQ15113 449 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 EXT1Q16394 746 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 SYT16Q17RD7 645 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 HECTD2Q5U5R9 776 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 DUPD1Q68J44 220 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 TMEM214Q6NUQ4 689 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 HIBCHQ6NVY1 386 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 RPUSD3Q6P087 351 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 PAQR3Q6TCH7 311 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 TMEM205Q6UW68 189 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 MBOAT1Q6ZNC8 495 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 VN1R4Q7Z5H5 301 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 LAPTM4BQ86VI4 370 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 KLHL7Q8IXQ5 586 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 ARHGEF39Q8N4T4 335 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 MFSD9Q8NBP5 474 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 OR51Q1Q8NH59 317 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 VPS39Q96JC1 886 aa8.39□□□□□ -1.07
CTNNA1-240ENST00000523912 CAPZA3Q96KX2 299 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms