RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ZNF860A6NHJ4 632 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 HAT1O14929 419 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 NME2P1O60361 137 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 FKBP9O95302 570 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 PTMAP06454 111 aaKnown RBP10.94□□□□□ -0.66
SDCBP-211ENST00000523441 NME2P22392 152 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 TPP2P29144 1249 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-211ENST00000523441 ADAM8P78325 824 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 PRAMEP78395 509 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 IQCB1Q15051 598 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 THEMIS2Q5TEJ8 643 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 FBXW10Q5XX13 1052 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 H3F3CQ6NXT2 135 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 AFTPHQ6ULP2 937 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 PAQR7Q86WK9 346 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 RPS19BP1Q86WX3 136 aaKnown RBP10.94□□□□□ -0.66
SDCBP-211ENST00000523441 CLYBLQ8N0X4 340 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 OR13J1Q8NGT2 312 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 TSLPQ969D9 159 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 TMEM125Q96AQ2 219 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 MVB12AQ96EY5 273 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 CCDC42Q96M95 316 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 ZNF778Q96MU6 729 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 FOPNLQ96NB1 174 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 PLCD4Q9BRC7 762 aa10.94□□□□□ -0.66
SDCBP-211ENST00000523441 CLEC4MQ9H2X3 399 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-211ENST00000523441 NHEJ1Q9H9Q4 299 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-211ENST00000523441 RPH3AQ9Y2J0 694 aaPredicted RBP10.94□□□□□ -0.66
SDCBP-211ENST00000523441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.94□□□□□ -0.66
SDCBP-211ENST00000523441 IGKV1-8A0A0C4DH67 115 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 MROH6A6NGR9 719 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 A8MUA0 341 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 KIAA1324LA8MWY0 1029 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-211ENST00000523441 NPIPA2E9PIF3 369 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 NPIPA3F8WFD2 350 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 PROM1O43490 865 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 RDH16O75452 317 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 SYF2O95926 243 aaKnown RBP10.93□□□□□ -0.66
SDCBP-211ENST00000523441 TFEBP19484 476 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 CYB561P49447 251 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 EIF3BP55884 814 aaKnown RBP10.93□□□□□ -0.66
SDCBP-211ENST00000523441 OR4D2P58180 307 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 ABRAXAS2Q15018 415 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 NSDHLQ15738 373 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 EXT1Q16394 746 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 NDUFA9Q16795 377 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 KCTD11Q693B1 232 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 ZNF585AQ6P3V2 769 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 CLEC9AQ6UXN8 241 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 PPP1R21Q6ZMI0 780 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 ZNF534Q76KX8 674 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 OTOAQ7RTW8 1153 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 SPNS2Q8IVW8 549 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 ACRBPQ8NEB7 543 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 WFDC11Q8NEX6 87 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 OR8K1Q8NGG5 319 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 OR52N2Q8NGI0 321 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 GOT1L1Q8NHS2 421 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-211ENST00000523441 M1APQ8TC57 530 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 PEX11GQ96HA9 241 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 CCDC138Q96M89 665 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 OR2A5Q96R48 311 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 LPAR4Q99677 370 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 C19orf43Q9BQ61 176 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 TP63Q9H3D4 680 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-211ENST00000523441 MMP25Q9NPA2 562 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 DLL4Q9NR61 685 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 MARCH4Q9P2E8 410 aaPredicted RBP10.93□□□□□ -0.66
SDCBP-211ENST00000523441 ZNF407Q9C0G0 2248 aa10.93□□□□□ -0.66
SDCBP-211ENST00000523441 VPS13CQ709C8 3753 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 FAM166BA8MTA8 275 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 KLK8O60259 260 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 CTAG2O75638 210 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 GAS8O95995 478 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 PPARGP37231 505 aaPredicted RBP10.92□□□□□ -0.66
SDCBP-211ENST00000523441 SLC26A5P58743 744 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 HYAL2Q12891 473 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 USP10Q14694 798 aaKnown RBP10.92□□□□□ -0.66
SDCBP-211ENST00000523441 PARP6Q2NL67 630 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 CMPK2Q5EBM0 449 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.92□□□□□ -0.66
SDCBP-211ENST00000523441 GARNL3Q5VVW2 1013 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 ICE2Q659A1 982 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 WDR53Q7Z5U6 358 aaPredicted RBP10.92□□□□□ -0.66
SDCBP-211ENST00000523441 SULF2Q8IWU5 870 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 MCOLN3Q8TDD5 553 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 SMPDL3AQ92484 453 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 NINJ1Q92982 152 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 IQCDQ96DY2 449 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 GBP4Q96PP9 640 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 PPP1R2P1Q96PQ5 205 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 OLFM1Q99784 485 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 OSBPL8Q9BZF1 889 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 ATG10Q9H0Y0 220 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 ENAMQ9NRM1 1142 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 CATSPERZQ9NTU4 200 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 ALKBH4Q9NXW9 302 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 KLK4Q9Y5K2 254 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 DUSP10Q9Y6W6 482 aa10.92□□□□□ -0.66
SDCBP-211ENST00000523441 EML6Q6ZMW3 1958 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms