RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 OR9A4Q8NGU2 314 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 HMGCLL1Q8TB92 370 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 CREB3L4Q8TEY5 395 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 SPATA13Q96N96 652 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 SECISBP2Q96T21 854 aaKnown RBP12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 MAK16Q9BXY0 300 aaKnown RBP12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 ZDHHC11Q9H8X9 412 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 SAE1Q9UBE0 346 aaPredicted RBP12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 KRT87PA6NCN2 255 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 TUBAL3A6NHL2 446 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 LRRC10BA6NIK2 292 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 FAM47E-STBD1D6RA91 191 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 P2RX6O15547 441 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 SMPD2O60906 423 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 PHF2O75151 1096 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 VPS26AO75436 327 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 BMP7P18075 431 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 XCR1P46094 333 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 AVPR1BP47901 424 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 GEMP55040 296 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 KRTAP1-1Q07627 177 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 ACTN3Q08043 901 aaPredicted RBP12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 ITIH4Q14624 930 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 FILIP1LQ4L180 1135 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 SLC13A5Q86YT5 568 aaPredicted RBP12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 RFX6Q8HWS3 928 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 OR2A5Q96R48 311 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 VAT1Q99536 393 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 PIP5K1AQ99755 562 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 RSPH14Q9UHP6 348 aa12.96□□□□□ -0.33
NKX3-1-202ENST00000523261 ARHGAP21Q5T5U3 1957 aa12.96□□□□□ -0.34
NKX3-1-202ENST00000523261 H0YIG0 161 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 WDR1O75083 606 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 GPC4O75487 556 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 IFNA2P01563 188 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 OR56A5P0C7T3 313 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 PECAM1P16284 738 aaPredicted RBP12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 CCR7P32248 378 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 NR2C2P49116 596 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 PPIAP62937 165 aaKnown RBP12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 HSPA14Q0VDF9 509 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 NAA25Q14CX7 972 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 POU4F3Q15319 338 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 CCSMST1Q4G0I0 132 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 C1orf185Q5T7R7 199 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 MDGA2Q7Z553 956 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 ARMC10Q8N2F6 343 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 OR51Q1Q8NH59 317 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 DEPPQ9NTK1 212 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 FOXD3Q9UJU5 478 aaPredicted RBP12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 LIPGQ9Y5X9 500 aa12.95□□□□□ -0.34
NKX3-1-202ENST00000523261 IGKV1-8A0A0C4DH67 115 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 FAM166BA8MTA8 275 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 HAX1O00165 279 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 ANXA9O76027 345 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 NSA2O95478 260 aaKnown RBP12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 IGHG3P01860 377 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 CMPK1P30085 196 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 RHAGQ02094 409 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 ABRAXAS2Q15018 415 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 NSDHLQ15738 373 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 DENND5AQ6IQ26 1287 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 BZW1Q7L1Q6 419 aaKnown RBP12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 PRSS41Q7RTY9 318 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 PCGF5Q86SE9 256 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 CYP4Z2PQ8N1L4 340 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 PLPP5Q8NEB5 264 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 LINC01560Q8TB33 94 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 TSLPQ969D9 159 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 RAD51AP1Q96B01 352 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 ACAT2Q9BWD1 397 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 GBA3Q9H227 469 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 NLE1Q9NVX2 485 aaPredicted RBP12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 HCN3Q9P1Z3 774 aa12.94□□□□□ -0.34
NKX3-1-202ENST00000523261 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 FEZF1A0PJY2 475 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 PINLYPA6NC86 204 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 CLDN4O14493 209 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 TXNDC9O14530 226 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 SLC16A5O15375 505 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 BMP5P22003 454 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 UBE2HP62256 183 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 NDUFA9Q16795 377 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 TRILQ7L0X0 811 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 ASZ1Q8WWH4 475 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 PIGTQ969N2 578 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 RERGQ96A58 199 aaPredicted RBP12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 CDKN2AIPNLQ96HQ2 116 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 YIPF4Q9BSR8 244 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 CNPPD1Q9BV87 410 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 TRHDEQ9UKU6 1024 aa12.93□□□□□ -0.34
NKX3-1-202ENST00000523261 HSPB2A8KAH6 182 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 MAGEB17A8MXT2 336 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 ACOT7O00154 380 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 FCHO1O14526 889 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 DVL2O14641 736 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 PHF1O43189 567 aaPredicted RBP12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 OR1I1O60431 355 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 C1orf105O95561 183 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms