RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 NTNG1Q9Y2I2 539 aa15.31■□□□□ 0.04
IGHV3-42-201ENST00000520410 IGLV3-12A0A075B6K2 115 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 IGHV1-45A0A0A0MS14 117 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 ZNF860A6NHJ4 632 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 USP27XA6NNY8 438 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 SLC16A5O15375 505 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 JRKO75564 520 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 SEC24DO94855 1032 aaPredicted RBP15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 CELA2AP08217 269 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 PRR35P0CG20 571 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 XCR1P46094 333 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 ITGA8P53708 1063 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 CSNK1G2P78368 415 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 MORF4L2Q15014 288 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 PHKG1Q16816 387 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 ATG9BQ674R7 924 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 CAPN12Q6ZSI9 719 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 KIAA0408Q6ZU52 694 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 PRSS41Q7RTY9 318 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 IGDCC3Q8IVU1 814 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 SUN3Q8TAQ9 357 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 GRHL3Q8TE85 626 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 SLC13A3Q8WWT9 602 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 NAPGQ99747 312 aaPredicted RBP15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 EGFL8Q99944 293 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 HAUS8Q9BT25 410 aa15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 C19orf25Q9UFG5 118 aaPredicted RBP15.3■□□□□ 0.04
IGHV3-42-201ENST00000520410 HECTD1Q9ULT8 2610 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 IGHV3-20A0A0C4DH32 117 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 A8MUI8 341 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 TTI1O43156 1089 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 NDUFS4O43181 175 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 OR1F1O43749 312 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 RDH16O75452 317 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 CDC123O75794 336 aaPredicted RBP15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 CBX6O95503 412 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 SERPINA7P05543 415 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 FDXRP22570 491 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 GABRB3P28472 473 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 BCL6P41182 706 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 TSFMP43897 325 aaKnown RBP15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 AP2B1P63010 937 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 ZNF33BQ06732 778 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 PDIA2Q13087 525 aaKnown RBP15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 FAM53BQ14153 422 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 BTBD16Q32M84 506 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 TEDDM1Q5T9Z0 273 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 B3GNTL1Q67FW5 361 aaPredicted RBP15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 TRMT10BQ6PF06 316 aaKnown RBP15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 LCTLQ6UWM7 567 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 SYDE1Q6ZW31 735 aaPredicted RBP15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 FRA10AC1Q70Z53 315 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 SLC26A11Q86WA9 606 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 OR51Q1Q8NH59 317 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 THAP11Q96EK4 314 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 SNF8Q96H20 258 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 TSNARE1Q96NA8 513 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 SLC5A6Q9Y289 635 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 DYRK1BQ9Y463 629 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 SAR1BQ9Y6B6 198 aa15.29■□□□□ 0.04
IGHV3-42-201ENST00000520410 PCM1Q15154 2024 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 EFCAB8A8MWE9 144 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 H0YIG0 161 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 BMP10O95393 424 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 NSA2O95478 260 aaKnown RBP15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 DDAH2O95865 285 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 RNF224P0DH78 156 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 ITGAMP11215 1152 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 CCR8P51685 355 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 RELAQ04206 551 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 CSHL1Q14406 222 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 ABHD17BQ5VST6 288 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 LANCL3Q6ZV70 420 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 VN1R4Q7Z5H5 301 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 CNTN4Q8IWV2 1026 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 KCT2Q8NC54 265 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 FBXO36Q8NEA4 188 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 ATL1Q8WXF7 558 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 SLCO2A1Q92959 643 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 PEX11GQ96HA9 241 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 LMF1Q96S06 567 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 OLFM1Q99784 485 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 TGIF2Q9GZN2 237 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 VN1R1Q9GZP7 353 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 OLAHQ9NV23 265 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 TEKT2Q9UIF3 430 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 ERRFI1Q9UJM3 462 aaPredicted RBP15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 OSGIN2Q9Y236 505 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 VWA7Q9Y334 891 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 NAALAD2Q9Y3Q0 740 aa15.28■□□□□ 0.04
IGHV3-42-201ENST00000520410 DOPEY2Q9Y3R5 2298 aa15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 NPEPPSL1A6NEC2 478 aa15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 PCDH17O14917 1159 aa15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 ICAM2P13598 275 aa15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 SLC12A2P55011 1212 aa15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 TIAL1Q01085 375 aaKnown RBP eCLIP15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 ACTN3Q08043 901 aaPredicted RBP15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 RGS1Q08116 209 aa15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 PCOLCEQ15113 449 aa15.27■□□□□ 0.04
IGHV3-42-201ENST00000520410 DUPD1Q68J44 220 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms