RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 KCNC2Q96PR1 638 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 EXOSC4Q9NPD3 245 aaKnown RBP12.41□□□□□ -0.42
SMAD1-215ENST00000515385 SIRT5Q9NXA8 310 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 NUDT4Q9NZJ9 180 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 NEU3Q9UQ49 428 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 FKBP7Q9Y680 259 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 PI15O43692 258 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 PEX14O75381 377 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 BEST1O76090 585 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 OR5F1O95221 314 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 IFNA7P01567 189 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 RAF1P04049 648 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 HMGN1P05114 100 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 GPC1P35052 558 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 CYP4F2P78329 520 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 VLDLRP98155 873 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 DMC1Q14565 340 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.41□□□□□ -0.42
SMAD1-215ENST00000515385 SV2CQ496J9 727 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 GTDC1Q4AE62 458 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 IGSF11Q5DX21 431 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 DDI2Q5TDH0 399 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 TRIQKQ629K1 86 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 BICRALQ6AI39 1079 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 METAP1DQ6UB28 335 aaPredicted RBP12.41□□□□□ -0.42
SMAD1-215ENST00000515385 MSANTD1Q6ZTZ1 278 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 ANKS3Q6ZW76 656 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 CPA6Q8N4T0 437 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 OR9Q1Q8NGQ5 310 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 OR4L1Q8NH43 312 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 SLC25A46Q96AG3 418 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 TESCQ96BS2 214 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 DIRAS2Q96HU8 199 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 QRFPRQ96P65 431 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 OR5M11Q96RB7 305 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 GMLQ99445 158 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 IER2Q9BTL4 223 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 MED10Q9BTT4 135 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 PIGUQ9H490 435 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 FOLH1BQ9HBA9 442 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 AMBNQ9NP70 447 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 SNTG1Q9NSN8 517 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 IMPAD1Q9NX62 359 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF226Q9NYT6 803 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF224Q9NZL3 707 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 SH3BP4Q9P0V3 963 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 ENOPH1Q9UHY7 261 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 SSR3Q9UNL2 185 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 CCL27Q9Y4X3 112 aa12.41□□□□□ -0.42
SMAD1-215ENST00000515385 A0A1W2PRG6 482 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 TUBAL3A6NHL2 446 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 NCF1BA6NI72 391 aaPredicted RBP12.4□□□□□ -0.42
SMAD1-215ENST00000515385 NCF1CA8MVU1 366 aaPredicted RBP12.4□□□□□ -0.42
SMAD1-215ENST00000515385 GFRA2O00451 464 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 TSPAN4O14817 238 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 HOXD4P09016 255 aaPredicted RBP12.4□□□□□ -0.42
SMAD1-215ENST00000515385 HOXB9P17482 250 aaPredicted RBP12.4□□□□□ -0.42
SMAD1-215ENST00000515385 CCR1P32246 355 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 KDELR2P33947 212 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 TAF6P49848 677 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 CRISP3P54108 245 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 ARPP19P56211 112 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 HOXC5Q00444 222 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 ABRQ12979 859 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 PTGR1Q14914 329 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 WSCD2Q2TBF2 565 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 FBXO48Q5FWF7 155 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 PLAG1Q6DJT9 500 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 NLRP8Q86W28 1048 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 LIX1Q8N485 282 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 TOP6BLQ8N6T0 577 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 PNPLA1Q8N8W4 532 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 B3GNT7Q8NFL0 401 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 OR52B6Q8NGF0 335 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 OR10Q1Q8NGQ4 319 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 CREB3L4Q8TEY5 395 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 AP3S1Q92572 193 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 CIDECQ96AQ7 238 aaPredicted RBP12.4□□□□□ -0.42
SMAD1-215ENST00000515385 ZSWIM3Q96MP5 696 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 TRIM62Q9BVG3 475 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 ABCB9Q9NP78 766 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 RAD18Q9NS91 495 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 MCUBQ9NWR8 336 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 MS4A12Q9NXJ0 267 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 ZNF112Q9UJU3 913 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 DUSP12Q9UNI6 340 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 VPS9D1Q9Y2B5 631 aa12.4□□□□□ -0.42
SMAD1-215ENST00000515385 FAM240BA0A1B0GVZ2 78 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 HYKKA2RU49 373 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 FGF18O76093 207 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ODC1P11926 461 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF250P15622 560 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 ARSBP15848 533 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 PTPRAP18433 802 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 DDCP20711 480 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 S100A3P33764 101 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 CD86P42081 329 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 NUDT6P53370 316 aa12.39□□□□□ -0.43
SMAD1-215ENST00000515385 BTG1P62324 171 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms