RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 RNF111Q6ZNA4 994 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 DHDDSQ86SQ9 333 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 FAM20CQ8IXL6 584 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 GPR156Q8NFN8 814 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 CADM4Q8NFZ8 388 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.33□□□□□ -0.442e-11■□□□□ 10.7
PVT1-203ENST00000513868 FAM174AQ8TBP5 190 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 JADE3Q92613 823 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 KLHDC7BQ96G42 594 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 PITHD1Q9GZP4 211 aaPredicted RBP12.33□□□□□ -0.44
PVT1-203ENST00000513868 PCDHAC1Q9H158 963 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 PCED1AQ9H1Q7 454 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 NANOGQ9H9S0 305 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 SERHLQ9NQF3 203 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 TMEM131Q92545 1883 aa12.33□□□□□ -0.44
PVT1-203ENST00000513868 A0A1W2PR77 199 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PRMT3O60678 531 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 NDUFS2O75306 463 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 B3GALT4O96024 378 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 DCNP07585 359 aaKnown RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 ANXA4P09525 319 aaPredicted RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 HSD17B1P14061 328 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 HOXB9P17482 250 aaPredicted RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 PRPS1L1P21108 318 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 CXCR2P25025 360 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 TIA1P31483 386 aaKnown RBP eCLIP12.32□□□□□ -0.441e-5■□□□□ 11
PVT1-203ENST00000513868 CLNS1AP54105 237 aaKnown RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 ILF3Q12906 894 aaKnown RBP eCLIP12.32□□□□□ -0.443e-7■■■□□ 17.4
PVT1-203ENST00000513868 TRAP1Q12931 704 aaKnown RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 FLOT2Q14254 428 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 RBBP5Q15291 538 aaKnown RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 UGT8Q16880 541 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PRR23BQ6ZRT6 265 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 COMMD6Q7Z4G1 85 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 AMIGO1Q86WK6 493 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SYT12Q8IV01 421 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SFTPA2Q8IWL1 248 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PHACTR4Q8IZ21 702 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 METTL4Q8N3J2 472 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 HIPK4Q8NE63 616 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 OR2L3Q8NG85 312 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 OR4E2Q8NGC2 313 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 WDR48Q8TAF3 677 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SLC26A7Q8TE54 656 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PATE1Q8WXA2 126 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PYDC1Q8WXC3 89 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 GFM2Q969S9 779 aaKnown RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 OR52E6Q96RD3 313 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 MS4A8Q9BY19 250 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SLC6A20Q9NP91 592 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 AASDHPPTQ9NRN7 309 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 NMRK1Q9NWW6 199 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 VAPAQ9P0L0 249 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 TAAR2Q9P1P5 351 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 EXO1Q9UQ84 846 aaKnown RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 TNRC6BQ9UPQ9 1833 aaKnown RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 TRBV5-3A0A0A0MS03 114 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 H3BNX3 289 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SAP18O00422 153 aaKnown RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 BTN3A3O00478 584 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 STK25O00506 426 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SCN2BO60939 215 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 MYO1DO94832 1006 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 CHRM5P08912 532 aaPredicted RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 ANPEPP15144 967 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PTX3P26022 381 aaPredicted RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 MAOBP27338 520 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PTPN6P29350 595 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 S100A3P33764 101 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SHMT2P34897 504 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 GCKP35557 465 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 WNT3P56703 355 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PLIN5Q00G26 463 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SELPLGQ14242 412 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 MAPKAPK3Q16644 382 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SPATS1Q496A3 300 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 MSRB3Q8IXL7 192 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 ADGRF3Q8IZF5 1079 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 MFSD2AQ8NA29 543 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 BHLHE22Q8NFJ8 381 aaPredicted RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 OR7A2PQ8NGA2 310 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 FLVCR1-AS1Q8TAF5 88 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 LCN9Q8WX39 176 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 PPM1MQ96MI6 270 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 CGREF1Q99674 301 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 ZNF717Q9BY31 904 aaPredicted RBP12.32□□□□□ -0.44
PVT1-203ENST00000513868 GSDMCQ9BYG8 508 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 CD320Q9NPF0 282 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SLC6A13Q9NSD5 602 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SLC25A37Q9NYZ2 338 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 OR6C2Q9NZP2 312 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 ADGRE2Q9UHX3 823 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 MUTYHQ9UIF7 546 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 MAN2B2Q9Y2E5 1009 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 BTBD3Q9Y2F9 522 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 SIT1Q9Y3P8 196 aa12.32□□□□□ -0.44
PVT1-203ENST00000513868 YY2O15391 372 aa12.31□□□□□ -0.44
PVT1-203ENST00000513868 AKAP10O43572 662 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms