RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 PABPC5Q96DU9 382 aaKnown RBP4.28□□□□□ -1.72
SSBP2-217ENST00000513785 ABHD8Q96I13 439 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 ZNF830Q96NB3 372 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-217ENST00000513785 TKTL2Q9H0I9 626 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 SNX25Q9H3E2 840 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 HAUS4Q9H6D7 363 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 NHEJ1Q9H9Q4 299 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-217ENST00000513785 APOBEC3GQ9HC16 384 aaKnown RBP4.28□□□□□ -1.72
SSBP2-217ENST00000513785 CISHQ9NSE2 258 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 FAM118AQ9NWS6 357 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 DDX43Q9NXZ2 648 aaKnown RBP4.28□□□□□ -1.72
SSBP2-217ENST00000513785 TUBGCP4Q9UGJ1 667 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 BARX2Q9UMQ3 279 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-217ENST00000513785 ARHGAP26Q9UNA1 814 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 FAF1Q9UNN5 650 aaPredicted RBP4.28□□□□□ -1.72
SSBP2-217ENST00000513785 BRWD1Q9NSI6 2320 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 GBF1Q92538 1859 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 KIAA1671Q9BY89 1806 aa4.28□□□□□ -1.72
SSBP2-217ENST00000513785 CASTOR2A6NHX0 329 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 LILRA5A6NI73 299 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 EIF3CLB5ME19 914 aaKnown RBP4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TMEM189-UBE2V1I3L0A0 370 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CYB561D2O14569 222 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 NCAM2O15394 837 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 SPINT2O43291 252 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TADA2AO75478 443 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 B3GAT3O94766 335 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 EGFP01133 1207 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 PAEPP09466 180 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CCDC175P0C221 793 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 VDRP11473 427 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 ODC1P11926 461 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 GZMAP12544 262 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 ITGA2P17301 1181 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 POLR2CP19387 275 aaPredicted RBP4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CPOXP36551 454 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 LHX1P48742 406 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 ERVK11-1P61568 191 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CDR2Q01850 454 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 INCA1Q0VD86 236 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 NAB2Q15742 525 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 UPP1Q16831 310 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TMEM35AQ53FP2 167 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CLLU1OSQ5K130 101 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 WDR59Q6PJI9 974 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TMEM270Q6UE05 265 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 RAD9BQ6WBX8 426 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 SCARA5Q6ZMJ2 495 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 QSOX2Q6ZRP7 698 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 KCTD8Q6ZWB6 473 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 GPR180Q86V85 440 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 UNC93AQ86WB7 457 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 METTL23Q86XA0 190 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TMEM139Q8IV31 216 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 C1orf87Q8N0U7 546 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 LRRC43Q8N309 656 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 MSANTD4Q8NCY6 345 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 OR2AK2Q8NG84 335 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 NFKBIDQ8NI38 313 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 HTRA1Q92743 480 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 BADQ92934 168 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 ABTB1Q969K4 478 aaPredicted RBP4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TOP1MTQ969P6 601 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 SENP8Q96LD8 212 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CASD1Q96PB1 797 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CHP1Q99653 195 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 AGPAT1Q99943 283 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 NEURL2Q9BR09 285 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TMEM175Q9BSA9 504 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 GPR88Q9GZN0 384 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 PDCL3Q9H2J4 239 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 MMP25Q9NPA2 562 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 KLHL1Q9NR64 748 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 SLC6A13Q9NSD5 602 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TMEM30AQ9NV96 361 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 SEPT11Q9NVA2 429 aaKnown RBP4.27□□□□□ -1.73
SSBP2-217ENST00000513785 TBC1D13Q9NVG8 400 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 MIOSQ9NXC5 875 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 LUZP4Q9P127 313 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 STK39Q9UEW8 545 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CAMK2AQ9UQM7 478 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 CEPT1Q9Y6K0 416 aa4.27□□□□□ -1.73
SSBP2-217ENST00000513785 ATP8B3O60423 1300 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 TSC2P49815 1807 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 A0A087X0T9 212 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 A0A1B0GU03 582 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 A8MXQ7 604 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 KIF2AO00139 706 aaPredicted RBP4.26□□□□□ -1.73
SSBP2-217ENST00000513785 VCYO14598 125 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 RTN2O75298 545 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 DDHD2O94830 711 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 LCA5LO95447 670 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 LSM8O95777 96 aaKnown RBP4.26□□□□□ -1.73
SSBP2-217ENST00000513785 H2AFZP0C0S5 128 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 FAM228BP0C875 321 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 MYOD1P15172 320 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 CYP11B1P15538 503 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 TYMPP19971 482 aa4.26□□□□□ -1.73
SSBP2-217ENST00000513785 WARSP23381 471 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms