RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 CCDC68Q9H2F9 335 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 KCNF1Q9H3M0 494 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 GRPEL1Q9HAV7 217 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 TAC3Q9UHF0 121 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 DHRS7Q9Y394 339 aa11.9□□□□□ -0.5
VEGFA-216ENST00000512683 A0A0A6YYC8 382 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 TRGV8A0A0C4DH27 118 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 GOLGA8MH3BSY2 632 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 I3L1I5 382 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 CCL21O00585 134 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 UNC5CO95185 931 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 F7P08709 466 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 KCNK10P57789 538 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 YBX1P67809 324 aaKnown RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 MEF2AQ02078 507 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 DHX34Q14147 1143 aaKnown RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 HKDC1Q2TB90 917 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 CASC4Q6P4E1 433 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 CYHR1Q6ZMK1 362 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 LRRC56Q8IYG6 542 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 LGI4Q8N135 537 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 DTWD1Q8N5C7 304 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 NAT8LQ8N9F0 302 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 PLPP5Q8NEB5 264 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 CALML6Q8TD86 181 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 SIGLEC10Q96LC7 697 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 NAP1L3Q99457 506 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 SLC30A3Q99726 388 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 MESP1Q9BRJ9 268 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 UNKQ9C0B0 810 aaKnown RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 CLK4Q9HAZ1 481 aaKnown RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 XAB2Q9HCS7 855 aaKnown RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 SAMD15Q9P1V8 674 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 STOX2Q9P2F5 926 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-216ENST00000512683 PCYOX1Q9UHG3 505 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 MED16Q9Y2X0 877 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 LRBAP50851 2863 aa11.89□□□□□ -0.51
VEGFA-216ENST00000512683 TTI1O43156 1089 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 NRP2O60462 931 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 ITGAMP11215 1152 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 PRF1P14222 555 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 CCND1P24385 295 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 MST1P26927 711 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 HTR1EP28566 365 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 GRK3P35626 688 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 BCL6P41182 706 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 SKP1P63208 163 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 EEF1A2Q05639 463 aaKnown RBP11.88□□□□□ -0.51
VEGFA-216ENST00000512683 CTBP1Q13363 440 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 THOC5Q13769 683 aaKnown RBP11.88□□□□□ -0.51
VEGFA-216ENST00000512683 MEP1AQ16819 746 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 ZXDCQ2QGD7 858 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-216ENST00000512683 ZNF766Q5HY98 468 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 ACER2Q5QJU3 275 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 ZNF470Q6ECI4 717 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 FAAH2Q6GMR7 532 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 UGT3A1Q6NUS8 523 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 ZNF549Q6P9A3 640 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 Q6ZPB1 254 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-216ENST00000512683 GDF7Q7Z4P5 450 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 DENND6AQ8IWF6 608 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 EID3Q8N140 333 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 GABPB2Q8TAK5 448 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-216ENST00000512683 ZNF669Q96BR6 464 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-216ENST00000512683 TM4SF19Q96DZ7 209 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 CCDC120Q96HB5 630 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 CCDC138Q96M89 665 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 VN1R1Q9GZP7 353 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 MMP25Q9NPA2 562 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
VEGFA-216ENST00000512683 SNX12Q9UMY4 172 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 ZNF835Q9Y2P0 537 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 SLC22A7Q9Y694 548 aa11.88□□□□□ -0.51
VEGFA-216ENST00000512683 DIDO1Q9BTC0 2240 aaKnown RBP11.88□□□□□ -0.51
VEGFA-216ENST00000512683 CTAGE9A4FU28 777 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 ASPDHA6ND91 283 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 A8MUI8 341 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 H7BY64 318 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 CES2O00748 559 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 SLC19A2O60779 497 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 ESRRAP11474 423 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 COX6B1P14854 86 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 CD46P15529 392 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 CAPN3P20807 821 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 FNTAP49354 379 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 ZNF33BQ06732 778 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 RNASEH2BQ5TBB1 312 aaKnown RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 TMEM214Q6NUQ4 689 aaKnown RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 ADCK2Q7Z695 626 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 SLC5A8Q8N695 610 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 GPATCH11Q8N954 259 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 TMEM178AQ8NBL3 297 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 FAM98AQ8NCA5 519 aaKnown RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 OR51Q1Q8NH59 317 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 GIMAP7Q8NHV1 300 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 PRAP1Q96NZ9 151 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms