RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 UNC5DQ6UXZ4 953 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 LANCL3Q6ZV70 420 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 CD163Q86VB7 1156 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 FAM98AQ8NCA5 519 aaKnown RBP11.53□□□□□ -0.56
DDR1-267ENST00000512336 LILRB4Q8NHJ6 448 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 LKAAEAR1Q8TD35 194 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 ASB5Q8WWX0 329 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 MVB12AQ96EY5 273 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 RAB11FIP5Q9BXF6 653 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 LIME1Q9H400 295 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 KCNK13Q9HB14 408 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 RNF6Q9Y252 685 aa11.53□□□□□ -0.56
DDR1-267ENST00000512336 RUVBL1Q9Y265 456 aaKnown RBP11.53□□□□□ -0.56
DDR1-267ENST00000512336 HCFC1P51610 2035 aa11.52□□□□□ -0.56
DDR1-267ENST00000512336 A0A0A6YYC8 382 aaPredicted RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 OR2A25A4D2G3 310 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 I3L1I5 382 aaPredicted RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 FOXS1O43638 330 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 SPOPO43791 374 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 GPC4O75487 556 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 NEURL1O76050 574 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 SEC31AO94979 1220 aaKnown RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 TPOP07202 933 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 SP1P08047 785 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 HOXD4P09016 255 aaPredicted RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 ZNF24P17028 368 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 COMTP21964 271 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 CTNNA2P26232 953 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 CHRNB4P30926 498 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 FOXN2P32314 431 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 EMP3P54852 163 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 OC90Q02509 493 aaPredicted RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 CUL1Q13616 776 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 POU6F1Q14863 301 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 CCSMST1Q4G0I0 132 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 SEL1L2Q5TEA6 688 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 SLC25A25Q6KCM7 469 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 Q71RC1 249 aaPredicted RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 CPEB2Q7Z5Q1 589 aaKnown RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 CSNK1A1LQ8N752 337 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 OR2A1Q8NGT9 310 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 STYXQ8WUJ0 223 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 METTL21AQ8WXB1 218 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 HDAC10Q969S8 669 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 LRRC1Q9BTT6 524 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 VN1R1Q9GZP7 353 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 KCNJ16Q9NPI9 418 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 DNAJB12Q9NXW2 375 aaKnown RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 FEZ2Q9UHY8 353 aaPredicted RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 ST6GALNAC2Q9UJ37 374 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 GNPTGQ9UJJ9 305 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
DDR1-267ENST00000512336 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.57
DDR1-267ENST00000512336 INTS1Q8N201 2190 aaKnown RBP11.52□□□□□ -0.57
DDR1-267ENST00000512336 GTF3C1Q12789 2109 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 AKAP6Q13023 2319 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 A0A1W2PPV9 198 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 CCDC162PA2VCL2 907 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 GABRR3A8MPY1 467 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 IQCF5A8MTL0 148 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 FOSL1P15407 271 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 PTGS2P35354 604 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 CETN2P41208 172 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 BDKRB1P46663 353 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 MAPKAPK3Q16644 382 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 MFSD4BQ5TF39 518 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 LRRC8BQ6P9F7 803 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 TAOK1Q7L7X3 1001 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 CCDC71Q8IV32 467 aaPredicted RBP11.51□□□□□ -0.57
DDR1-267ENST00000512336 SHISA5Q8N114 240 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 RPRMLQ8N4K4 120 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 CPSF7Q8N684 471 aaKnown RBP11.51□□□□□ -0.57
DDR1-267ENST00000512336 FAM57AQ8TBR7 257 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 ASZ1Q8WWH4 475 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 CAVIN3Q969G5 261 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 SMR3AQ99954 134 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 DPH7Q9BTV6 452 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 HEMGNQ9BXL5 484 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 RAB17Q9H0T7 212 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 PIH1D1Q9NWS0 290 aaKnown RBP11.51□□□□□ -0.57
DDR1-267ENST00000512336 ALG6Q9Y672 507 aa11.51□□□□□ -0.57
DDR1-267ENST00000512336 A0A1B0GTH9 108 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 FAM187AA6NFU0 413 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 APOC4-APOC2K7ER74 178 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 PSTPIP1O43586 416 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 VPS26AO75436 327 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 SUN1O94901 812 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 APOC2P02655 101 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 MARCKSL1P49006 195 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 SNRPNP63162 240 aaKnown RBP11.5□□□□□ -0.57
DDR1-267ENST00000512336 DHX34Q14147 1143 aaKnown RBP11.5□□□□□ -0.57
DDR1-267ENST00000512336 MINDY4Q4G0A6 757 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 ZNF468Q5VIY5 522 aaPredicted RBP11.5□□□□□ -0.57
DDR1-267ENST00000512336 TMEM211Q6ICI0 200 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 TTC23LQ6PF05 361 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 BBS12Q6ZW61 710 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 ARHGEF39Q8N4T4 335 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 HORMAD2Q8N7B1 307 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 HMGCLL1Q8TB92 370 aa11.5□□□□□ -0.57
DDR1-267ENST00000512336 AENQ8WTP8 325 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms