RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ANKRD20A1Q5TYW2 823 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 ANKRD20A3Q5VUR7 823 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 PAOXQ6QHF9 649 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 LANCL3Q6ZV70 420 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 ANKRD37Q7Z713 158 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 RPS19BP1Q86WX3 136 aaKnown RBP10.89□□□□□ -0.67
RNF4-216ENST00000511859 LRRC8AQ8IWT6 810 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 ZZZ3Q8IYH5 903 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 LRRN4CLQ8ND94 238 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 WFDC11Q8NEX6 87 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 C16orf52Q8NHV5 167 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 RERGQ96A58 199 aaPredicted RBP10.89□□□□□ -0.67
RNF4-216ENST00000511859 SLC6A16Q9GZN6 736 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 CDCP1Q9H5V8 836 aa10.89□□□□□ -0.67
RNF4-216ENST00000511859 A0A1W2PPV9 198 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 NDC80O14777 642 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 CDC40O60508 579 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■□□□□ 8.2
RNF4-216ENST00000511859 C1orf105O95561 183 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 RAF1P04049 648 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 TMEM253P0C7T8 217 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 CYLC1P35663 651 aaPredicted RBP10.88□□□□□ -0.67
RNF4-216ENST00000511859 KIR2DL3P43628 341 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 ZFP36L2P47974 494 aaKnown RBP10.88□□□□□ -0.67
RNF4-216ENST00000511859 MAT1AQ00266 395 aaKnown RBP10.88□□□□□ -0.67
RNF4-216ENST00000511859 RELAQ04206 551 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 ACTN3Q08043 901 aaPredicted RBP10.88□□□□□ -0.67
RNF4-216ENST00000511859 MINDY4Q4G0A6 757 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 EMC4Q5J8M3 183 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 PCGF5Q86SE9 256 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 PAQR7Q86WK9 346 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 CDC20BQ86Y33 519 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 ARHGEF39Q8N4T4 335 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 OR10Q1Q8NGQ4 319 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 GSDMBQ8TAX9 411 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 MAGEC3Q8TD91 643 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 MCOLN3Q8TDD5 553 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 HAUS1Q96CS2 278 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 OR2A5Q96R48 311 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 LPAR4Q99677 370 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 PLCD4Q9BRC7 762 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 DESI2Q9BSY9 194 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 SARGQ9BW04 601 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 TFR2Q9UP52 801 aa10.88□□□□□ -0.67
RNF4-216ENST00000511859 KLF13Q9Y2Y9 288 aaPredicted RBP10.88□□□□□ -0.67
RNF4-216ENST00000511859 EPN1Q9Y6I3 576 aaPredicted RBP10.88□□□□□ -0.67
RNF4-216ENST00000511859 H7C0C1 242 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 HS6ST1O60243 411 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 OR1I1O60431 355 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 STK10O94804 968 aaKnown RBP10.87□□□□□ -0.67
RNF4-216ENST00000511859 TNNT1P13805 278 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 FOXN2P32314 431 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 PPARGP37231 505 aaPredicted RBP10.87□□□□□ -0.67
RNF4-216ENST00000511859 CCNFP41002 786 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 ATP5OP48047 213 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 YBX1P67809 324 aaKnown RBP10.87□□□□□ -0.67
RNF4-216ENST00000511859 CCZ1BP86790 482 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 CCZ1P86791 482 aaPredicted RBP10.87□□□□□ -0.67
RNF4-216ENST00000511859 CMPK2Q5EBM0 449 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 ZNF468Q5VIY5 522 aaPredicted RBP10.87□□□□□ -0.67
RNF4-216ENST00000511859 PAMR1Q6UXH9 720 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 MICALCLQ6ZW33 695 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 SULF2Q8IWU5 870 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 RHOT2Q8IXI1 618 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 CCDC170Q8IYT3 715 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 RPRMLQ8N4K4 120 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 OR5M3Q8NGP4 307 aa10.87□□□□□ -0.67
RNF4-216ENST00000511859 MRPS30Q9NP92 439 aaKnown RBP10.87□□□□□ -0.67
RNF4-216ENST00000511859 TTC7AQ9ULT0 858 aaPredicted RBP10.87□□□□□ -0.67
RNF4-216ENST00000511859 MXRA5Q9NR99 2828 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 MROH6A6NGR9 719 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 APOC4-APOC2K7ER74 178 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 NSA2O95478 260 aaKnown RBP10.86□□□□□ -0.67
RNF4-216ENST00000511859 APOC2P02655 101 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 EZRP15311 586 aaKnown RBP10.86□□□□□ -0.67
RNF4-216ENST00000511859 TPH1P17752 444 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 AOAHP28039 575 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 TRHRP34981 398 aaPredicted RBP10.86□□□□□ -0.67
RNF4-216ENST00000511859 MAGEA1P43355 309 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 HLCSP50747 726 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 KEAP1Q14145 624 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 SPARCL1Q14515 664 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 POU6F1Q14863 301 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 SPA17Q15506 151 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 SLC25A35Q3KQZ1 300 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 GXYLT1Q4G148 440 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 PAPD4Q6PIY7 484 aaKnown RBP10.86□□□□□ -0.67
RNF4-216ENST00000511859 ZNF227Q86WZ6 799 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 KLHDC8BQ8IXV7 354 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 RCOR2Q8IZ40 523 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 OR51Q1Q8NH59 317 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 ELP5Q8TE02 316 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 FOPNLQ96NB1 174 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 KCNF1Q9H3M0 494 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 NEUROD4Q9HD90 331 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 SPATA7Q9P0W8 599 aa10.86□□□□□ -0.67
RNF4-216ENST00000511859 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 hCG_1818297A0A087WSY0 165 aa10.85□□□□□ -0.67
RNF4-216ENST00000511859 A0A0U1RQJ8 604 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms