RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SNAP47	Q5SQN1	464 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	FRG2	Q64ET8	278 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	FBXO42	Q6P3S6	717 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	ARHGAP22	Q7Z5H3	698 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	PLD3	Q8IV08	490 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SLITRK4	Q8IW52	837 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	MFSD9	Q8NBP5	474 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	TWIST2	Q8WVJ9	160 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	USP7	Q93009	1102 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	THAP11	Q96EK4	314 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	PRR11	Q96HE9	360 aa	Predicted RBP	11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SEC16B	Q96JE7	1060 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	SLC41A2	Q96JW4	573 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	FRG2B	Q96QU4	278 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	CCT7	Q99832	543 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	ZFYVE21	Q9BQ24	234 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	RHBG	Q9H310	441 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	ELOVL6	Q9H5J4	265 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	PDE7B	Q9NP56	450 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	PFDN4	Q9NQP4	134 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	MARCO	Q9UEW3	520 aa	Predicted RBP	11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	PPT2	Q9UMR5	302 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	PCDHGA4	Q9Y5G9	962 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	DNAJC15	Q9Y5T4	150 aa		11.46	□□□□□ -0.57
RACK1-223	ENST00000510199	ANKDD1B	A6NHY2	528 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199		A8MU76	341 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	FOXE1	O00358	373 aa	Predicted RBP	11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	HDAC3	O15379	428 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	PRAMEF10	O60809	474 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	CTSV	O60911	334 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	PDYN	P01213	254 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	MSL3P1	P0C860	447 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	PCNA	P12004	261 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	CEACAM1	P13688	526 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	NELFE	P18615	380 aa	Known RBP	11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	BCL6	P41182	706 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	PIK3CB	P42338	1070 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	MLLT3	P42568	568 aa	Predicted RBP	11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	ARL4D	P49703	201 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	SEPHS1	P49903	392 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	SEC24C	P53992	1094 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	PHEX	P78562	749 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	INSM1	Q01101	510 aa	Predicted RBP	11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	ZFP36L1	Q07352	338 aa	Known RBP	11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	TMTC4	Q5T4D3	741 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	RBM44	Q6ZP01	1051 aa	Known RBP	11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.45	□□□□□ -0.58	4e-7	■■□□□ 11.5
RACK1-223	ENST00000510199	D2HGDH	Q8N465	521 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	DNAJC22	Q8N4W6	341 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	ANKRD53	Q8N9V6	530 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	TRPV3	Q8NET8	790 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	HUS1B	Q8NHY5	278 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	SELENOM	Q8WWX9	145 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	CCDC74B	Q96LY2	380 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	TMEM74	Q96NL1	305 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	OR2A5	Q96R48	311 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	SIKE1	Q9BRV8	207 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	TRIM55	Q9BYV6	548 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	NSRP1	Q9H0G5	558 aa	Known RBP	11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	EPN3	Q9H201	632 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	BRF2	Q9HAW0	419 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	FAM60A	Q9NP50	221 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	SOHLH2	Q9NX45	425 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	PSD3	Q9NYI0	1048 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	ZFP69B	Q9UJL9	534 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	AP1M2	Q9Y6Q5	423 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	SEC16A	O15027	2179 aa		11.45	□□□□□ -0.58
RACK1-223	ENST00000510199	FER1L5	A0AVI2	2057 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	CNOT1	A5YKK6	2376 aa	Known RBP	11.44	□□□□□ -0.58
RACK1-223	ENST00000510199		A0A0J9YVX5	310 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	TRPC5OS	A6NMA1	111 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	TMX2-CTNND1	H3BSU7	103 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	ZNF195	O14628	629 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	PIP5K1B	O14986	540 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	SRPX2	O60687	465 aa	Predicted RBP	11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	SKAP2	O75563	359 aa	Predicted RBP	11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	CLEC3A	O75596	197 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	DKK1	O94907	266 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	TROVE2	P10155	538 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	HSD3B1	P14060	373 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	ALOX15	P16050	662 aa	Predicted RBP	11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	HSD3B2	P26439	372 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	CCKBR	P32239	447 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	GABRA4	P48169	554 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	HTR6	P50406	440 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	NEK2	P51955	445 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	INHBC	P55103	352 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	CYP4F3	Q08477	520 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	CSTF3	Q12996	717 aa	Known RBP	11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	ABRAXAS2	Q15018	415 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	PDCD2	Q16342	344 aa	Predicted RBP	11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	CCDC157	Q569K6	752 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	PHF19	Q5T6S3	580 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	CDCP2	Q5VXM1	449 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	FAM219B	Q5XKK7	198 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	CGB2	Q6NT52	195 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	TRIM46	Q7Z4K8	759 aa		11.44	□□□□□ -0.58
RACK1-223	ENST00000510199	VN1R5	Q7Z5H4	357 aa		11.44	□□□□□ -0.58

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