RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 CCR10P46092 362 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 ARSFP54793 590 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 CDKL1Q00532 357 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 FRA10AC1Q70Z53 315 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 TMPRSS11BQ86T26 416 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 ADAMTSL2Q86TH1 951 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 GPSM1Q86YR5 675 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 IFT20Q8IY31 132 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 MFSD9Q8NBP5 474 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 ABHD11Q8NFV4 315 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 SLC5A11Q8WWX8 675 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 KIAA1191Q96A73 305 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 WBP1Q96G27 269 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 ABHD17AQ96GS6 310 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 DPH2Q9BQC3 489 aaPredicted RBP12.9□□□□□ -0.34
SNF8-206ENST00000509989 ANKZF1Q9H8Y5 726 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 ZNF304Q9HCX3 659 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 POLHQ9Y253 713 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 MAN2B2Q9Y2E5 1009 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 ZNF462Q96JM2 2506 aa12.9□□□□□ -0.34
SNF8-206ENST00000509989 A0A096LPK6 155 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 ZNF860A6NHJ4 632 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 VSTM2BA6NLU5 285 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 OR1F1O43749 312 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 LTA4HP09960 611 aaKnown RBP12.89□□□□□ -0.35
SNF8-206ENST00000509989 IL1RNP18510 177 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 CD22P20273 847 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 PHBP35232 272 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 MAGEA12P43365 314 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 PMS2P54278 862 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 ATP6V0D1P61421 351 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 REEP5Q00765 189 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 MC1RQ01726 317 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 RELAQ04206 551 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 HYAL2Q12891 473 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 NFATC3Q12968 1075 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 KCNAB2Q13303 367 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 FAM214AQ32MH5 1076 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 NXPE4Q6UWF7 544 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 SLCO4C1Q6ZQN7 724 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 PTRH1Q86Y79 214 aaKnown RBP12.89□□□□□ -0.35
SNF8-206ENST00000509989 KLHDC8AQ8IYD2 350 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 OR2Y1Q8NGV0 311 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 APOBEC4Q8WW27 367 aaKnown RBP12.89□□□□□ -0.35
SNF8-206ENST00000509989 COL26A1Q96A83 441 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 MMABQ96EY8 250 aaPredicted RBP12.89□□□□□ -0.35
SNF8-206ENST00000509989 FAM129AQ9BZQ8 928 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 PCBD2Q9H0N5 130 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 VPS11Q9H270 941 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 KLHL31Q9H511 634 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 GEMIN8Q9NWZ8 242 aaKnown RBP12.89□□□□□ -0.35
SNF8-206ENST00000509989 CD274Q9NZQ7 290 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNF8-206ENST00000509989 GPN3Q9UHW5 284 aaPredicted RBP12.89□□□□□ -0.35
SNF8-206ENST00000509989 PTBP2Q9UKA9 531 aaKnown RBP12.89□□□□□ -0.35
SNF8-206ENST00000509989 RNF112Q9ULX5 631 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 ACOT9Q9Y305 439 aa12.89□□□□□ -0.35
SNF8-206ENST00000509989 V9GYY5 206 aaPredicted RBP12.89□□□□□ -0.35
SNF8-206ENST00000509989 KCNE1BA0A087WTH5 132 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 A6NL46 340 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 TRIM49D1C9J1S8 452 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 SGK494L7N484 410 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 SOCS6O14544 535 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 TBX6O95947 436 aaPredicted RBP12.88□□□□□ -0.35
SNF8-206ENST00000509989 RECKO95980 971 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 SHBGP04278 402 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 CCND1P24385 295 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 CRABP2P29373 138 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 FOLR3P41439 243 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 SCTRP47872 440 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 CCL11P51671 97 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 CCR8P51685 355 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 RPS15AP62244 130 aaKnown RBP12.88□□□□□ -0.35
SNF8-206ENST00000509989 OLR1P78380 273 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 KLC1Q07866 573 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 RAPSNQ13702 412 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 SLC29A2Q14542 456 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 MUM1Q2TAK8 710 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 YOD1Q5VVQ6 348 aaPredicted RBP12.88□□□□□ -0.35
SNF8-206ENST00000509989 TMEM214Q6NUQ4 689 aaKnown RBP12.88□□□□□ -0.35
SNF8-206ENST00000509989 VN1R5Q7Z5H4 357 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 MRGPREQ86SM8 312 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 ASPGQ86U10 573 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 PDPRQ8NCN5 879 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 STT3BQ8TCJ2 826 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 SLC13A3Q8WWT9 602 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 ATL1Q8WXF7 558 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 RERGQ96A58 199 aaPredicted RBP12.88□□□□□ -0.35
SNF8-206ENST00000509989 C8orf44Q96CB5 159 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 CATSPER2Q96P56 530 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 HAUS8Q9BT25 410 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 DHRS4Q9BTZ2 278 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 ACSS2Q9NR19 701 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 WWOXQ9NZC7 414 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 TP53TG5Q9Y2B4 290 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 DYRK1BQ9Y463 629 aa12.88□□□□□ -0.35
SNF8-206ENST00000509989 HS3ST3B1Q9Y662 390 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms