RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 JRKO75564 520 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 NSA2O95478 260 aaKnown RBP14.57□□□□□ -0.08
TPM3-219ENST00000509409 HIST1H2AGP0C0S8 130 aaPredicted RBP14.57□□□□□ -0.08
TPM3-219ENST00000509409 HIST1H2ADP20671 130 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 GRK3P35626 688 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 TNFSF10P50591 281 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 TBPL1P62380 186 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 DHX9Q08211 1270 aaKnown RBP14.57□□□□□ -0.08
TPM3-219ENST00000509409 PCOLCEQ15113 449 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 RNASEH2BQ5TBB1 312 aaKnown RBP14.57□□□□□ -0.08
TPM3-219ENST00000509409 ABHD17BQ5VST6 288 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 AGTRAPQ6RW13 159 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 PAQR3Q6TCH7 311 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 LURAP1LQ8IV03 231 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 SLC35F6Q8N357 371 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 ARHGEF39Q8N4T4 335 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 C2CD4AQ8NCU7 369 aaPredicted RBP14.57□□□□□ -0.08
TPM3-219ENST00000509409 OR51Q1Q8NH59 317 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 ACTRT1Q8TDG2 376 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 HIST1H2AHQ96KK5 128 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 CYTH2Q99418 400 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 HIST1H2AJQ99878 128 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 H2AFJQ9BTM1 129 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 TUBB6Q9BUF5 446 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 VN1R1Q9GZP7 353 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 ANKHQ9HCJ1 492 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 PPANQ9NQ55 473 aaKnown RBP14.57□□□□□ -0.08
TPM3-219ENST00000509409 STMN3Q9NZ72 180 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 HCN3Q9P1Z3 774 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 C19orf25Q9UFG5 118 aaPredicted RBP14.57□□□□□ -0.08
TPM3-219ENST00000509409 TEKT2Q9UIF3 430 aa14.57□□□□□ -0.08
TPM3-219ENST00000509409 KCNE1BA0A087WTH5 132 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 SGK494L7N484 410 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 E2F3O00716 465 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 SLC16A5O15375 505 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 SEC24DO94855 1032 aaPredicted RBP14.56□□□□□ -0.08
TPM3-219ENST00000509409 TTC4O95801 387 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 WDPCPO95876 746 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 IL1RNP18510 177 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 DCTP40126 519 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 CSNK1G2P78368 415 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 CRYMQ14894 314 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 BBS9Q3SYG4 887 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 SPANXN3Q5MJ09 141 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 HIBCHQ6NVY1 386 aaPredicted RBP14.56□□□□□ -0.08
TPM3-219ENST00000509409 MBOAT1Q6ZNC8 495 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 PRSS41Q7RTY9 318 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 VN1R4Q7Z5H5 301 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 CPEB2Q7Z5Q1 589 aaKnown RBP14.56□□□□□ -0.08
TPM3-219ENST00000509409 PCGF5Q86SE9 256 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 ZCCHC10Q8TBK6 192 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 SLC13A3Q8WWT9 602 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 LINGO1Q96FE5 620 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 PCM1Q15154 2024 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 DOCK10Q96BY6 2186 aa14.56□□□□□ -0.08
TPM3-219ENST00000509409 HIVEP3Q5T1R4 2406 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 IGHV3-20A0A0C4DH32 117 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 A0A1B0GUH1 482 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 A0A1W2PQ72 361 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 DNALI1O14645 258 aaPredicted RBP14.55□□□□□ -0.08
TPM3-219ENST00000509409 LCMT2O60294 686 aaKnown RBP14.55□□□□□ -0.08
TPM3-219ENST00000509409 BANF1O75531 89 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 AHSGP02765 367 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 CDH1P12830 882 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 CCND1P24385 295 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 BCL6P41182 706 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 XCR1P46094 333 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 CDKN2DP55273 166 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 SNRPNP63162 240 aaKnown RBP14.55□□□□□ -0.08
TPM3-219ENST00000509409 TIAL1Q01085 375 aaKnown RBP eCLIP14.55□□□□□ -0.08
TPM3-219ENST00000509409 ZNF33BQ06732 778 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 ACTN3Q08043 901 aaPredicted RBP14.55□□□□□ -0.08
TPM3-219ENST00000509409 PDAP1Q13442 181 aaKnown RBP14.55□□□□□ -0.08
TPM3-219ENST00000509409 BTBD16Q32M84 506 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 RBM20Q5T481 1227 aaKnown RBP14.55□□□□□ -0.08
TPM3-219ENST00000509409 CAPN13Q6MZZ7 669 aaPredicted RBP14.55□□□□□ -0.08
TPM3-219ENST00000509409 ASPGQ86U10 573 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 FJX1Q86VR8 437 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 SLC26A11Q86WA9 606 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 AMER2Q8N7J2 671 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 IMMP1LQ96LU5 166 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 NAT9Q9BTE0 207 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 TRIM54Q9BYV2 358 aa14.55□□□□□ -0.08
TPM3-219ENST00000509409 OR2W5A6NFC9 320 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 ZSCAN12O43309 604 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 RASAL1O95294 804 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 SERPIND1P05546 499 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 GABRB3P28472 473 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 KCNK10P57789 538 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 IL2P60568 153 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 SP140Q13342 867 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 TMEM214Q6NUQ4 689 aaKnown RBP14.54□□□□□ -0.08
TPM3-219ENST00000509409 LCTLQ6UWM7 567 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 GFRALQ6UXV0 394 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 LANCL3Q6ZV70 420 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 GPATCH11Q8N954 259 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 KCT2Q8NC54 265 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 TM4SF19Q96DZ7 209 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 TAAR6Q96RI8 345 aa14.54□□□□□ -0.08
TPM3-219ENST00000509409 SLX1AQ9BQ83 275 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms