RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SERPINB9P50453 376 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 PGDP52209 483 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 RRADP55042 308 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 KCNC4Q03721 635 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 KLRB1Q12918 225 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 NAE1Q13564 534 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 ARHGAP19Q14CB8 494 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 RASA2Q15283 850 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 NKAIN1Q4KMZ8 207 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 WASHC2DQ5SRD0 308 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 CES4AQ5XG92 561 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 CPZQ66K79 652 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 FRMPD2BQ6IN97 320 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 ADNP2Q6IQ32 1131 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 LRRC8EQ6NSJ5 796 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 RAPH1Q70E73 1250 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 PLD3Q8IV08 490 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 APLFQ8IW19 511 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 ARHGEF39Q8N4T4 335 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 METTL27Q8N6F8 245 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 PDPRQ8NCN5 879 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 MCOLN3Q8TDD5 553 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 ANKRD7Q92527 254 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 EXT2Q93063 718 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 RERGQ96A58 199 aaPredicted RBP8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 ALKBH8Q96BT7 664 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 TSPAN17Q96FV3 270 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 GBP5Q96PP8 586 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 DPH7Q9BTV6 452 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 SLC25A23Q9BV35 468 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 TMEM109Q9BVC6 243 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 YIPF2Q9BWQ6 316 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 CUTCQ9NTM9 273 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 XPR1Q9UBH6 696 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 TAC3Q9UHF0 121 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 ANAPC2Q9UJX6 822 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 PTBP2Q9UKA9 531 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 ACOT9Q9Y305 439 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 KLK4Q9Y5K2 254 aa8.35□□□□□ -1.07
PDLIM5-213ENST00000509357 TLN1Q9Y490 2541 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 GCN1Q92616 2671 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 A0A087X1B8 175 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 LOC105369274A0A096LPK9 316 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 LOC102723532A0A0G2JNH3 316 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 A0A1B0GX78 115 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 HYKKA2RU49 373 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 OR2A25A4D2G3 310 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 CCDC151A5D8V7 595 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 C4orf51C9J302 202 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 PPP6CO00743 305 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 HAT1O14929 419 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 P2RX6O15547 441 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 LCMT2O60294 686 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 KERAO60938 352 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 SIX3O95343 332 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 WISP1O95388 367 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 TBX6O95947 436 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 STATHP02808 62 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 CAPN1P07384 714 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 HIST1H2AGP0C0S8 130 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 NR1D1P20393 614 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 HIST1H2ADP20671 130 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 ITGAXP20702 1163 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 HSPA7P48741 367 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 SLC12A2P55011 1212 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 CDKL1Q00532 357 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 MEF2AQ02078 507 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 TLE1Q04724 770 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 SLC18A2Q05940 514 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 RAPSNQ13702 412 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 ATP1A4Q13733 1029 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 MPP2Q14168 576 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 SSPNQ14714 243 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 COLEC12Q5KU26 742 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 CATSPEREQ5SY80 951 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 YOD1Q5VVQ6 348 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 ICE2Q659A1 982 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 TCTN3Q6NUS6 607 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 FBXO42Q6P3S6 717 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 MED25Q71SY5 747 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 TRABD2AQ86V40 505 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 PAQR7Q86WK9 346 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 OR4N4Q8N0Y3 316 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 C4orf33Q8N1A6 199 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 TMEM102Q8N9M5 508 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 CLEC1AQ8NC01 280 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 ZNF740Q8NDX6 193 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 COL26A1Q96A83 441 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 CABS1Q96KC9 395 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 HIST1H2AHQ96KK5 128 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 FER1L6-AS2Q96M78 137 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 CCDC138Q96M89 665 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 NSUN5Q96P11 429 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 IP6K3Q96PC2 410 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 HIST1H2AJQ99878 128 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 ZFYVE21Q9BQ24 234 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 H2AFJQ9BTM1 129 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 TRIM55Q9BYV6 548 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 ZNF446Q9NWS9 450 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 ARL15Q9NXU5 204 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms