RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 LRRC53A6NM62 1247 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 MEI4A8MW99 385 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 H7C0C1 242 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 I3L4J1 428 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SLC22A2O15244 555 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 GATCO43716 136 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SNAPINO95295 136 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 METTL18O95568 372 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PTTG1O95997 202 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 FGGP02679 453 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 UGT2B4P06133 528 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PGK2P07205 417 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SERPINA6P08185 405 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 HSPD1P10809 573 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SFTPCP11686 197 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ATP6V1B1P15313 513 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ZNF3P17036 446 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 CD53P19397 219 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 F8A1P23610 371 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PON1P27169 355 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 CD40LGP29965 261 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 CIITAP33076 1130 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 HNF1BP35680 557 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 HSD17B2P37059 387 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 HADHAP40939 763 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 MAGEA11P43364 429 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 MTNR1AP48039 350 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 NT5C2P49902 561 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 AP1S2P56377 157 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 VBP1P61758 197 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 POLR2GP62487 172 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 MYBPC1Q00872 1141 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 IFITM2Q01629 132 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ZNF33BQ06732 778 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 KLHL30Q0D2K2 578 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 BST2Q10589 180 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PPIL2Q13356 520 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 MAPRE1Q15691 268 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 STK11Q15831 433 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TYSND1Q2T9J0 566 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 RABGAP1LQ5R372 815 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ITPRIPL1Q6GPH6 555 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 CENPPQ6IPU0 288 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PLEKHA7Q6IQ23 1121 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 RETSATQ6NUM9 610 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ZNF544Q6NX49 715 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ZNF704Q6ZNC4 412 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PLEKHG7Q6ZR37 379 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 FAM47EQ6ZV65 393 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 RAPH1Q70E73 1250 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TRILQ7L0X0 811 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 G2E3Q7L622 706 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 OTOAQ7RTW8 1153 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 NT5DC3Q86UY8 548 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 DDIASQ8IXT1 998 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 DIS3L2Q8IYB7 885 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SLC38A6Q8IZM9 456 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TTC5Q8N0Z6 440 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 XXYLT1Q8NBI6 393 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 CLEC18CQ8NCF0 446 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TTLQ8NG68 377 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SLC26A7Q8TE54 656 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PSPC1Q8WXF1 523 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 KRT35Q92764 455 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TOP1MTQ969P6 601 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 NCLNQ969V3 563 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 C12orf43Q96C57 262 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ARHGEF26Q96DR7 871 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PDXPQ96GD0 296 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 B3GALT6Q96L58 329 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 C1orf74Q96LT6 269 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 C17orf62Q9BQA9 187 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 NTPCRQ9BSD7 190 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 THTPAQ9BU02 230 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 KIFC1Q9BW19 673 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TSSK1BQ9BXA7 367 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 AP1M1Q9BXS5 423 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ZNF717Q9BY31 904 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 CCSER1Q9C0I3 900 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 LMAN2LQ9H0V9 348 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TTYH1Q9H313 450 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TRABDQ9H4I3 376 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 CXorf21Q9HAI6 301 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SPAG4Q9NPE6 437 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 C20orf96Q9NUD7 363 aaPredicted RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SMARCAL1Q9NZC9 954 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 UPB1Q9UBR1 384 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 ZNF69Q9UC07 566 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 MOSPD1Q9UJG1 213 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 CPSF3Q9UKF6 684 aaKnown RBP4.84□□□□□ -1.63
LINC01088-205ENST00000509088 PSME2Q9UL46 239 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 TMEM5Q9Y2B1 443 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 INSL5Q9Y5Q6 135 aa4.84□□□□□ -1.63
LINC01088-205ENST00000509088 SLIT1O75093 1534 aa4.83□□□□□ -1.64
LINC01088-205ENST00000509088 RTL9Q8NET4 1388 aa4.83□□□□□ -1.64
LINC01088-205ENST00000509088 MROH5Q6ZUA9 1318 aa4.83□□□□□ -1.64
LINC01088-205ENST00000509088 C1orf232A0A0U1RR37 186 aa4.83□□□□□ -1.64
LINC01088-205ENST00000509088 ARHGEF37A1IGU5 675 aa4.83□□□□□ -1.64
LINC01088-205ENST00000509088 PRR23AA6NEV1 266 aa4.83□□□□□ -1.64
LINC01088-205ENST00000509088 SH2D7A6NKC9 451 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms