RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 ARID2Q68CP9 1835 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 EPM2AB3EWF7 344 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 TIMM44O43615 452 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 PRAF2O60831 178 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 APOA4P06727 396 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 EPORP19235 508 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 PSMA3P25788 255 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 DUTP33316 252 aaKnown RBP5.87□□□□□ -1.47
CHD1-205ENST00000508756 CRKLP46109 303 aaKnown RBP5.87□□□□□ -1.47
CHD1-205ENST00000508756 RGS7P49802 495 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 TMEM50BP56557 158 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 RBBP7Q16576 425 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 TAZQ16635 292 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 LRRC73Q5JTD7 316 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 NOTUMQ6P988 496 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 PAQR6Q6TCH4 344 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 C11orf57Q6ZUT1 292 aaPredicted RBP5.87□□□□□ -1.47
CHD1-205ENST00000508756 CPEB2Q7Z5Q1 589 aaKnown RBP5.87□□□□□ -1.47
CHD1-205ENST00000508756 PIGWQ7Z7B1 504 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 SLFN11Q7Z7L1 901 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 AMIGO1Q86WK6 493 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 GBP7Q8N8V2 638 aaPredicted RBP5.87□□□□□ -1.47
CHD1-205ENST00000508756 OR5T2Q8NGG2 359 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 OR4C15Q8NGM1 316 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 ATP8B4Q8TF62 1192 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 P2RX5Q93086 422 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 OVOL2Q9BRP0 275 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 TBC1D13Q9NVG8 400 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 ANAPC5Q9UJX4 755 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 MMP24Q9Y5R2 645 aa5.87□□□□□ -1.47
CHD1-205ENST00000508756 F8VVB4 439 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 F8VWA3 439 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 LUC7L3O95232 432 aaKnown RBP5.86□□□□□ -1.47
CHD1-205ENST00000508756 CD59P13987 128 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 OR1D5P58170 312 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 SRSF9Q13242 221 aaKnown RBP eCLIP5.86□□□□□ -1.47
CHD1-205ENST00000508756 MTHFSDQ2M296 383 aaKnown RBP5.86□□□□□ -1.47
CHD1-205ENST00000508756 GLIPR1L2Q4G1C9 344 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 CHMP1BQ7LBR1 199 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 TCEANCQ8N8B7 351 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 SNRNP27Q8WVK2 155 aaKnown RBP5.86□□□□□ -1.47
CHD1-205ENST00000508756 SIPA1Q96FS4 1042 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 NEDD4LQ96PU5 975 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 AP1M1Q9BXS5 423 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 RNF121Q9H920 327 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 B3GAT2Q9NPZ5 323 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 HACD3Q9P035 362 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 MOB4Q9Y3A3 225 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 NOTCH3Q9UM47 2321 aa5.86□□□□□ -1.47
CHD1-205ENST00000508756 ANXA2P2A6NMY6 339 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 H7C0S8 307 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 CCER2I3L3R5 266 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 CEACAM4O75871 244 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 RBMS1P29558 406 aaKnown RBP5.85□□□□□ -1.47
CHD1-205ENST00000508756 PDHA2P29803 388 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 RGS19P49795 217 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 GMPSP49915 693 aaPredicted RBP5.85□□□□□ -1.47
CHD1-205ENST00000508756 MFAP3P55082 362 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 LMO4P61968 165 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 ELAVL2Q12926 359 aaKnown RBP5.85□□□□□ -1.47
CHD1-205ENST00000508756 SLC1A5Q15758 541 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 FAM189A2Q15884 450 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 FAM174BQ3ZCQ3 159 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 TTC27Q6P3X3 843 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 MOXD1Q6UVY6 613 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 DNAJB7Q7Z6W7 309 aaPredicted RBP5.85□□□□□ -1.47
CHD1-205ENST00000508756 ZER1Q7Z7L7 766 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 CCDC60Q8IWA6 550 aaPredicted RBP5.85□□□□□ -1.47
CHD1-205ENST00000508756 FAM222BQ8WU58 562 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 ATXN7L3BQ96GX2 97 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 RBM41Q96IZ5 413 aaKnown RBP5.85□□□□□ -1.47
CHD1-205ENST00000508756 GDAP1L1Q96MZ0 367 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 AGAP4Q96P64 663 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 MGME1Q9BQP7 344 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 DNAI2Q9GZS0 605 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 NDE1Q9NXR1 346 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 SNX7Q9UNH6 387 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 PA2G4Q9UQ80 394 aaKnown RBP5.85□□□□□ -1.47
CHD1-205ENST00000508756 WIPI2Q9Y4P8 454 aa5.85□□□□□ -1.47
CHD1-205ENST00000508756 IL16Q14005 1332 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 GLTPD2A6NH11 291 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 FAM86B1E9PN63 330 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 NPIPB9F8W1W9 429 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 HSP90AA1P07900 732 aaKnown RBP5.84□□□□□ -1.47
CHD1-205ENST00000508756 FAM86B2P0C5J1 330 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 PDGFRAP16234 1089 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 AADACP22760 399 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 LY6DQ14210 128 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 UGCGQ16739 394 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 FAM166AQ6J272 317 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 ZNF343Q6P1L6 599 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 C9orf43Q8TAL5 461 aaPredicted RBP5.84□□□□□ -1.47
CHD1-205ENST00000508756 MIPOL1Q8TD10 442 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 GPATCH1Q9BRR8 931 aaKnown RBP5.84□□□□□ -1.47
CHD1-205ENST00000508756 GIMAP2Q9UG22 337 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 IL36AQ9UHA7 158 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 KLK13Q9UKR3 277 aa5.84□□□□□ -1.47
CHD1-205ENST00000508756 PCNX3Q9H6A9 2034 aa5.84□□□□□ -1.48
CHD1-205ENST00000508756 IGHV3OR16-10A0A075B7F0 116 aa5.83□□□□□ -1.48
CHD1-205ENST00000508756 G3V2L1 256 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms