RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 REXO5Q96IC2 774 aaKnown RBP10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 COQ10AQ96MF6 247 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 P2RY13Q9BPV8 354 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 AMBRA1Q9C0C7 1298 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 FARSBQ9NSD9 589 aaKnown RBP10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 SERTM1A2A2V5 107 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 CLDN25C9JDP6 229 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC1A7O00341 560 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 AREL1O15033 823 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 HS6ST1O60243 411 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 MMP20O60882 483 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 NDUFS2O75306 463 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 STK16O75716 305 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 KAT7O95251 611 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 CCNDBP1O95273 360 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 ANXA5P08758 320 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 C6P13671 934 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 EPORP19235 508 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 S100A3P33764 101 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 MAGEA2P43356 314 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 PREPP48147 710 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SOX9P48436 509 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SERPINB10P48595 397 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 RPS14P62263 151 aaKnown RBP10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 CSNK2BP67870 215 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 MVKQ03426 396 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 KCNC4Q03721 635 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 DLX2Q07687 328 aaPredicted RBP10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 TMEM115Q12893 351 aaPredicted RBP10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 KEAP1Q14145 624 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 PTGR1Q14914 329 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 DPY19L1Q2PZI1 675 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 GGTA1PQ4G0N0 100 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SPANXN4Q5MJ08 99 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 PLEKHS1Q5SXH7 462 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 ERICH5Q6P6B1 374 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SPESP1Q6UW49 350 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 DCP2Q8IU60 420 aaKnown RBP10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 RAVER1Q8IY67 606 aaKnown RBP10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 RGL4Q8IZJ4 473 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 PARP8Q8N3A8 854 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 CPA6Q8N4T0 437 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 ZBTB8BQ8NAP8 495 aaPredicted RBP10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SNRNP27Q8WVK2 155 aaKnown RBP10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 NCLNQ969V3 563 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 FKBP10Q96AY3 582 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 TESCQ96BS2 214 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 VPS35Q96QK1 796 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 FUNDC2Q9BWH2 189 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC12A9Q9BXP2 914 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SMURF2Q9HAU4 748 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 PARVBQ9HBI1 364 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 CCNB1IP1Q9NPC3 277 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 NECTIN3Q9NQS3 549 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SCN3BQ9NY72 215 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 KLQ9UEF7 1012 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 SNX6Q9UNH7 406 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 AP1M2Q9Y6Q5 423 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 LRRK1Q38SD2 2015 aa10.65□□□□□ -0.7
SH3RF1-203ENST00000508685 FUOMA2VDF0 154 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 EVPLLA8MZ36 301 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 B4GAT1O43505 415 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 BCAS1O75363 584 aaPredicted RBP10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 FTH1P02794 183 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 JUNDP17535 347 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 POU3F3P20264 500 aaPredicted RBP10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 PBLDP30039 288 aaPredicted RBP10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 GDI1P31150 447 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 GGT5P36269 586 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 WASP42768 502 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 TRPC1P48995 793 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 BCAP31P51572 246 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 VAC14Q08AM6 782 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 MEP1AQ16819 746 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 LDLRAP1Q5SW96 308 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 GALNT18Q6P9A2 607 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 TMEM184AQ6ZMB5 413 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 MSRB3Q8IXL7 192 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 YAF2Q8IY57 180 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 SVOPQ8N4V2 548 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC15A4Q8N697 577 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 ASZ1Q8WWH4 475 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 SUSD6Q92537 303 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 APOL4Q9BPW4 351 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 CPPED1Q9BRF8 314 aaPredicted RBP10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC32A1Q9H598 525 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 PRSS16Q9NQE7 514 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 RAD18Q9NS91 495 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 SLC25A37Q9NYZ2 338 aa10.65□□□□□ -0.71
SH3RF1-203ENST00000508685 BRWD1Q9NSI6 2320 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 LOC730098B7Z3J9 87 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 GFYI3L273 518 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 PSMD11O00231 422 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 BCKDKO14874 412 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 PRMT3O60678 531 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 AP2A2O94973 939 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 C8GP07360 202 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 BCKDHAP12694 445 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 IL7RP16871 459 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms