RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TAF4O00268 1085 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 HAT1O14929 419 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 DSCR3O14972 297 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 RGS16O15492 202 aaPredicted RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 TAPBPO15533 448 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 OR1F1O43749 312 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 TIAF1O95411 115 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 RECKO95980 971 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 RAB40ALP0C0E4 278 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 C1GALT1C1LP0DN25 315 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 SPTBP11277 2137 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 MTHFD2P13995 350 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ZNF28P17035 718 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 KRT4P19013 534 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 TCN2P20062 427 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ITGAXP20702 1163 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 CRHR1P34998 444 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 RORAP35398 523 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 DLSTP36957 453 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 GDF5P43026 501 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 PHEXP78562 749 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 NFKB2Q00653 900 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 REEP5Q00765 189 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 IRF8Q02556 426 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 TLE3Q04726 772 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ASPHQ12797 758 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 FAM53BQ14153 422 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 HERC3Q15034 1050 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 CRTC2Q53ET0 693 aaPredicted RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 XKR6Q5GH73 641 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 C10orf62Q5T681 223 aaPredicted RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 FRMPD2BQ6IN97 320 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 FBXO42Q6P3S6 717 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 LRIG3Q6UXM1 1119 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 TMIGD1Q6UXZ0 262 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ZNF517Q6ZMY9 492 aaPredicted RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 CCDC81Q6ZN84 652 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ABHD13Q7L211 337 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ASPGQ86U10 573 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 HOMEZQ8IX15 550 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 MFSD9Q8NBP5 474 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 MZB1Q8WU39 189 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 FKBP10Q96AY3 582 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 REPS1Q96D71 796 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 SMC6Q96SB8 1091 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 TMEM79Q9BSE2 394 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 SPRTNQ9H040 489 aaPredicted RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 DRC3Q9H069 523 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 NT5DC2Q9H857 520 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 PRM3Q9NNZ6 103 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 NDOR1Q9UHB4 597 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ZFP69BQ9UJL9 534 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 NXT1Q9UKK6 140 aaKnown RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 PCDHGA6Q9Y5G7 932 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 PCDHGA4Q9Y5G9 962 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ITPR1Q14643 2758 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 DMXL2Q8TDJ6 3036 aa8.73□□□□□ -1.01
NUP54-207ENST00000508583 ANKRD11Q6UB99 2663 aaPredicted RBP8.73□□□□□ -1.01
NUP54-207ENST00000508583 CELSR3Q9NYQ7 3312 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 A0A088AWK7 358 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 ANKDD1BA6NHY2 528 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 ZNF891A8MT65 544 aaPredicted RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 H3BMH7 237 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 GOLGA8RI6L899 631 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 TK2O00142 265 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 NDUFS4O43181 175 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 OTCP00480 354 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 ALBP02768 609 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 MYL2P10916 166 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 ZNF10P21506 573 aaPredicted RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 ALAS2P22557 587 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 ATP5F1P24539 256 aaPredicted RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 ARL1P40616 181 aaPredicted RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 HNF4AP41235 474 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 CASP2P42575 452 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 SCTRP47872 440 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 AVPR1BP47901 424 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 KCNC1P48547 511 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 STXBP1P61764 594 aaKnown RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 HERVK_113P63132 956 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 PCDH1Q08174 1060 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 TGM3Q08188 693 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 GPS2Q13227 327 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 DNASE1L3Q13609 305 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 GTF2H2Q13888 395 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 SLBPQ14493 270 aaKnown RBP eCLIP8.72□□□□□ -1.01
NUP54-207ENST00000508583 RBBP5Q15291 538 aaKnown RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 PRTGQ2VWP7 1150 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 NKAIN1Q4KMZ8 207 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 CATSPEREQ5SY80 951 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 LIPJQ5W064 366 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 GTF2H2CQ6P1K8 395 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 SLCO4C1Q6ZQN7 724 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 TTLL10Q6ZVT0 673 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 TIPARPQ7Z3E1 657 aaKnown RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 SRRM1Q8IYB3 904 aaKnown RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 TEX9Q8N6V9 391 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 PTGR2Q8N8N7 351 aaPredicted RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 CCDC63Q8NA47 563 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 OR2W6PQ8NHA6 318 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms