RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 LY6DQ14210 128 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 ZNF74Q16587 644 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 MOGAT2Q3SYC2 334 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 HYIQ5T013 277 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 ADGRA1Q86SQ6 560 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 CDC20BQ86Y33 519 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 PTERQ96BW5 349 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 ABHD1Q96SE0 405 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 SEPHS2Q99611 448 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 STK26Q9P289 416 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 MAN1B1Q9UKM7 699 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 IFT172Q9UG01 1749 aa4.34□□□□□ -1.71
TOPBP1-206ENST00000508524 TUBGCP6Q96RT7 1819 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 TOPAZ1Q8N9V7 1692 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 A0A1W2PPM1 405 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 C22orf31O95567 290 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 LINGO3P0C6S8 592 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 CAPN2P17655 700 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 PTGER4P35408 488 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 MTHFRP42898 656 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 MAPK12P53778 367 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 MS4A2Q01362 244 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 MTF1Q14872 753 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 EFTUD2Q15029 972 aaKnown RBP eCLIP4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 EXT1Q16394 746 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 PRR27Q6MZM9 219 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 MFSD12Q6NUT3 480 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 ZNF774Q6NX45 483 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 DNAAF5Q86Y56 855 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 ERC1Q8IUD2 1116 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 THOC1Q96FV9 657 aaKnown RBP4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 C4orf45Q96LM5 186 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 NKX3-1Q99801 234 aaPredicted RBP4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 TLE6Q9H808 572 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 CSNK1G3Q9Y6M4 447 aa4.33□□□□□ -1.72
TOPBP1-206ENST00000508524 ARHGEF28Q8N1W1 1705 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 VPS8Q8N3P4 1428 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 O00370 1275 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 FPGTO14772 594 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 ARPC2O15144 300 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 IPO8O15397 1037 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 WDHD1O75717 1129 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 BEST1O76090 585 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 RAB40ALP0C0E4 278 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 GP1BBP13224 206 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 CCR10P46092 362 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 ITGA7Q13683 1181 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 LEKR1Q6ZMV7 388 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 KIF6Q6ZMV9 814 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 SH2D6Q7Z4S9 175 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 AQP11Q8NBQ7 271 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 ZNF830Q96NB3 372 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 CCDC3Q9BQI4 270 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 MXD3Q9BW11 206 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 TRIM6Q9C030 488 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 FAM49AQ9H0Q0 323 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 Q9H8V8 135 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 ANKZF1Q9H8Y5 726 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 MED20Q9H944 212 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 TEX10Q9NXF1 929 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 C19orf25Q9UFG5 118 aaPredicted RBP4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 WDR83OSQ9Y284 106 aa4.32□□□□□ -1.72
TOPBP1-206ENST00000508524 TULP4Q9NRJ4 1543 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 DHX57Q6P158 1386 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 IGHEP01854 428 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 HLA-FP30511 346 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 ACTN2P35609 894 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 ZNF75DP51815 510 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 TMEM50BP56557 158 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 KLC1Q07866 573 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 COX10Q12887 443 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 RIGQ13278 110 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 MCMDC2Q4G0Z9 681 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 MZT2BQ6NZ67 158 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 LGI2Q8N0V4 545 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 SYT2Q8N9I0 419 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 NUP37Q8NFH4 326 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 OR10Q1Q8NGQ4 319 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 MIPOL1Q8TD10 442 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 ATL1Q8WXF7 558 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 DGAT2Q96PD7 388 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 GCNAQ96QF7 691 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 SPAG5Q96R06 1193 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 SOSTQ9BQB4 213 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 CHST11Q9NPF2 352 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 OLAHQ9NV23 265 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 NSMCE4AQ9NXX6 385 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 HAO2Q9NYQ3 351 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 MUTYHQ9UIF7 546 aa4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 PPIEQ9UNP9 301 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-206ENST00000508524 BCL9O00512 1426 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 NUP155O75694 1391 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 ABCC11Q96J66 1382 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 KNDC1Q76NI1 1749 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 SNURFLB1AK76 121 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 PI4K2BG5E9Z4 385 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 ADAM20O43506 726 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 ALDH3A2P51648 485 aa4.3□□□□□ -1.72
TOPBP1-206ENST00000508524 XGP55808 180 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms