RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 PHF1O43189 567 aaPredicted RBP3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 OR52Z1P0C646 297 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 NR2F1P10589 423 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 GP9P14770 177 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 CDC25CP30307 473 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 ZFP36L2P47974 494 aaKnown RBP3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 OR1D5P58170 312 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 ACSM1Q08AH1 577 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 MAPRE1Q15691 268 aaKnown RBP3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 MS4A18Q3C1V0 323 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 ALDH1L2Q3SY69 923 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 RNF212Q495C1 297 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 EIPR1Q53HC9 387 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 CYB5D1Q6P9G0 228 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 CDHR3Q6ZTQ4 885 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 TCEANCQ8N8B7 351 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 TDRD5Q8NAT2 981 aaKnown RBP3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 TSACCQ96A04 125 aaPredicted RBP3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 ZNF414Q96IQ9 312 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 NEDD4LQ96PU5 975 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 NDNQ99608 321 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 RAVER2Q9HCJ3 691 aaKnown RBP3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 HACD3Q9P035 362 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 TXNDC16Q9P2K2 825 aa3.6□□□□□ -1.83
UBE2D3-225ENST00000508476 IGHV3-20A0A0C4DH32 117 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 IGHV3-38A0A0C4DH36 116 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 TRBC2A0A5B9 178 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 GALR3O60755 368 aaPredicted RBP3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 STARD3NLO95772 234 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 SERPING1P05155 500 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 MYOGP15173 224 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 AADACP22760 399 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 CSE1LP55060 971 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 BECN1Q14457 450 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 C3P1Q6ZMU1 363 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 CEACAM19Q7Z692 300 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 RYBPQ8N488 228 aaPredicted RBP3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 TTC30BQ8N4P2 665 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 POGLUT1Q8NBL1 392 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 OR10G7Q8NGN6 311 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 C1orf147Q96MC9 270 aaPredicted RBP3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 BTBD9Q96Q07 612 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 CHMP4AQ9BY43 222 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 ADNPQ9H2P0 1102 aa3.59□□□□□ -1.83
UBE2D3-225ENST00000508476 SLC1A7O00341 560 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 F3P13726 295 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 ATP4BP51164 291 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 RBPJQ06330 500 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 ZNF146Q15072 292 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 LACTB2Q53H82 288 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 ENOSF1Q7L5Y1 443 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 CPEB2Q7Z5Q1 589 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 GBP7Q8N8V2 638 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 OR52B6Q8NGF0 335 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 SSC4DQ8WTU2 575 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 TBC1D13Q9NVG8 400 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 NLGN3Q9NZ94 848 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 ERCC6Q03468 1493 aa3.58□□□□□ -1.84
UBE2D3-225ENST00000508476 GPRIN2O60269 458 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 CYTIPO60759 359 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 SAP30O75446 220 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 DUTP33316 252 aaKnown RBP3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 CETN2P41208 172 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 NEDD4P46934 1319 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 LIMK1P53667 647 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 FKBP3Q00688 224 aaKnown RBP3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 DUSP5Q16690 384 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 C9orf152Q5JTZ5 239 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 SUSD4Q5VX71 490 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 KRT39Q6A163 491 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 TLK2Q86UE8 772 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 MARCH9Q86YJ5 346 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 OR4N5Q8IXE1 308 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 ABCA7Q8IZY2 2146 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 SUMF1Q8NBK3 374 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 OR4D10Q8NGI6 311 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 OR4C15Q8NGM1 316 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 CCDC28BQ9BUN5 200 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 MAF1Q9H063 256 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 ACTL8Q9H568 366 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 GTSE1Q9NYZ3 720 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 MORF4L1Q9UBU8 362 aa3.57□□□□□ -1.84
UBE2D3-225ENST00000508476 PASKQ96RG2 1323 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 A0A087WZ39 114 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 C17orf105B2RV13 164 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 DIAPH2O60879 1101 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 EDNRAP25101 427 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 KHKP50053 298 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 ILF2Q12905 390 aaKnown RBP3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 PTGISQ16647 500 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 ERMARDQ5T6L9 678 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 ATP1A1-AS1Q5TC04 95 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 WDR78Q5VTH9 848 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 PHC2Q8IXK0 858 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 POMGNT2Q8NAT1 580 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 UBE2Q2Q8WVN8 375 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 SPSB1Q96BD6 273 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 LRRC3BQ96PB8 259 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms