RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 H6PDO95479 791 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 ABCB1P08183 1280 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-208ENST00000507823 HPCAL1P37235 193 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 WASP42768 502 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 ADRM1Q16186 407 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 TMEM259Q4ZIN3 620 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 CES5AQ6NT32 575 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 ERICH5Q6P6B1 374 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 USP51Q70EK9 711 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 NETO1Q8TDF5 533 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 SLC47A1Q96FL8 570 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 SPNS1Q9H2V7 528 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 PELI2Q9HAT8 420 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 ACSL5Q9ULC5 683 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 PCDHB11Q9Y5F2 797 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 A0A1W2PP55 124 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 C1orf226A1L170 272 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 RNASET2O00584 256 aaKnown RBP16.99■□□□□ 0.31
SFXN1-208ENST00000507823 CLPTM1O96005 669 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 HPRP00739 348 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 MAGEA2P43356 314 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 ZNF763Q0D2J5 394 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 CPTPQ5TA50 214 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 VN1R5Q7Z5H4 357 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 ZZZ3Q8IYH5 903 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 GOT1L1Q8NHS2 421 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-208ENST00000507823 TBC1D20Q96BZ9 403 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 BHLHE41Q9C0J9 482 aaPredicted RBP16.99■□□□□ 0.31
SFXN1-208ENST00000507823 CHST8Q9H2A9 424 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 RHBGQ9H310 441 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 WDR26Q9H7D7 661 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 WASH6PQ9NQA3 447 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 V9GYQ6 96 aa16.99■□□□□ 0.31
SFXN1-208ENST00000507823 TICRRQ7Z2Z1 1910 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 PLRG1O43660 514 aaKnown RBP16.98■□□□□ 0.31
SFXN1-208ENST00000507823 PRKD3O94806 890 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 EPN2O95208 641 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 CCNDBP1O95273 360 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 KCNK5O95279 499 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 MT-ND1P03886 318 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 ADARB1P78563 741 aaKnown RBP16.98■□□□□ 0.31
SFXN1-208ENST00000507823 SF1Q15637 639 aaKnown RBP16.98■□□□□ 0.31
SFXN1-208ENST00000507823 CYBRD1Q53TN4 286 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 IYDQ6PHW0 289 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 TBPL2Q6SJ96 375 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 COMMD6Q7Z4G1 85 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 FBXO30Q8TB52 745 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 TMBIM1Q969X1 311 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 PRPF18Q99633 342 aaKnown RBP16.98■□□□□ 0.31
SFXN1-208ENST00000507823 MYNNQ9NPC7 610 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 AP1M2Q9Y6Q5 423 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 TRIM64CA6NLI5 447 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 H0YAE9 185 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 ENGP17813 658 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 PPIBP23284 216 aaKnown RBP16.98■□□□□ 0.31
SFXN1-208ENST00000507823 PAX7P23759 505 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 SOX9P48436 509 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 RPS21P63220 83 aaKnown RBP16.98■□□□□ 0.31
SFXN1-208ENST00000507823 CTBSQ01459 385 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 NUMA1Q14980 2115 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 KIAA1161Q6NSJ0 714 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 LMNTD1Q8N9Z9 388 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 ABHD11Q8NFV4 315 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 VPS50Q96JG6 964 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 RDH12Q96NR8 316 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 IL17FQ96PD4 163 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 TIMM29Q9BSF4 260 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 PCBD2Q9H0N5 130 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 REEP4Q9H6H4 257 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 RMI1Q9H9A7 625 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 AASDHPPTQ9NRN7 309 aa16.98■□□□□ 0.31
SFXN1-208ENST00000507823 COL4A2P08572 1712 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 MYCLP1P12525 358 aaPredicted RBP16.97■□□□□ 0.31
SFXN1-208ENST00000507823 CAPGP40121 348 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 MTHFRP42898 656 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 ALDH3A2P51648 485 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 ARSFP54793 590 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 PHEXP78562 749 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 MYBPC3Q14896 1274 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 VMACQ2NL98 169 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 HKDC1Q2TB90 917 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 KCTD21Q4G0X4 260 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 MTSS1LQ765P7 747 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 PTOV1Q86YD1 416 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 CLECL1Q8IZS7 167 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 SVOPLQ8N434 492 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 SH3KBP1Q96B97 665 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 ERLEC1Q96DZ1 483 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 MTERF3Q96E29 417 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 PYURFQ96I23 114 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 RIPOR3Q96MK2 946 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 PITHD1Q9GZP4 211 aaPredicted RBP16.97■□□□□ 0.31
SFXN1-208ENST00000507823 NT5DC2Q9H857 520 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 PHPT1Q9NRX4 125 aaPredicted RBP16.97■□□□□ 0.31
SFXN1-208ENST00000507823 TM7SF3Q9NS93 570 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 USE1Q9NZ43 259 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 MYRFQ9Y2G1 1151 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 DOCK9Q9BZ29 2069 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 KCNJ13O60928 360 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 ALPLP05186 524 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms