RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 CD163Q86VB7 1156 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 CPSF7Q8N684 471 aaKnown RBP5.44□□□□□ -1.54
GYPB-208ENST00000507009 TMEM178AQ8NBL3 297 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 MDS2Q8NDY4 140 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 OR2A1Q8NGT9 310 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 OR4L1Q8NH43 312 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 ZCCHC10Q8TBK6 192 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 IMMP1LQ96LU5 166 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 ZNF778Q96MU6 729 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 PWWP2AQ96N64 755 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 FRMD6Q96NE9 622 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 CYTH2Q99418 400 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 DNAJC7Q99615 494 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 MACROD1Q9BQ69 325 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 VN1R1Q9GZP7 353 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 DRC3Q9H069 523 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 RNF32Q9H0A6 362 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 GSX1Q9H4S2 264 aaPredicted RBP5.44□□□□□ -1.54
GYPB-208ENST00000507009 CDCP1Q9H5V8 836 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 SYNPO2LQ9H987 977 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 CCM2LQ9NUG4 571 aaPredicted RBP5.44□□□□□ -1.54
GYPB-208ENST00000507009 MARCH4Q9P2E8 410 aaPredicted RBP5.44□□□□□ -1.54
GYPB-208ENST00000507009 C19orf25Q9UFG5 118 aaPredicted RBP5.44□□□□□ -1.54
GYPB-208ENST00000507009 TAC3Q9UHF0 121 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 GNPTGQ9UJJ9 305 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 ZNF835Q9Y2P0 537 aa5.44□□□□□ -1.54
GYPB-208ENST00000507009 SCN2AQ99250 2005 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SCN3AQ9NY46 2000 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 LOC102723996A0A087X1L8 192 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 A0A1B0GTH9 108 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 OR2A25A4D2G3 310 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 MROH6A6NGR9 719 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 ZNF860A6NHJ4 632 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SOWAHDA6NJG2 315 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 E7EVH7 732 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 E9PLN8 166 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SGK494L7N484 410 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 ADAM10O14672 748 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 HAT1O14929 419 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 TFECO14948 347 aaPredicted RBP5.43□□□□□ -1.54
GYPB-208ENST00000507009 PSMD3O43242 534 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 FOXS1O43638 330 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 MFAP3LO75121 409 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 NDUFS3O75489 264 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SLC25A12O75746 678 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SUN1O94901 812 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 TJP3O95049 919 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 IL1RNP18510 177 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 DNAJA1P31689 397 aaKnown RBP5.43□□□□□ -1.54
GYPB-208ENST00000507009 PTGS2P35354 604 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SLC26A3P40879 764 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 GRIA1P42261 906 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 XCR1P46094 333 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 AVPR1BP47901 424 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 IST1P53990 364 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 GDF10P55107 478 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SNTB1Q13884 538 aaKnown RBP5.43□□□□□ -1.54
GYPB-208ENST00000507009 TRIM14Q14142 442 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 CEBPEQ15744 281 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 NDUFA9Q16795 377 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SFT2D3Q587I9 215 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 KCTD11Q693B1 232 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 PLAG1Q6DJT9 500 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SLC25A25Q6KCM7 469 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 PAPD4Q6PIY7 484 aaKnown RBP5.43□□□□□ -1.54
GYPB-208ENST00000507009 TMEM205Q6UW68 189 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 ZNF534Q76KX8 674 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 FGD2Q7Z6J4 655 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 ANKRD37Q7Z713 158 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 PAQR7Q86WK9 346 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 CCDC71Q8IV32 467 aaPredicted RBP5.43□□□□□ -1.54
GYPB-208ENST00000507009 KIF2BQ8N4N8 673 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 SLC5A8Q8N695 610 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 HORMAD2Q8N7B1 307 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 OR10Q1Q8NGQ4 319 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 OR13J1Q8NGT2 312 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 THAP3Q8WTV1 239 aaPredicted RBP5.43□□□□□ -1.54
GYPB-208ENST00000507009 SREK1Q8WXA9 508 aaKnown RBP5.43□□□□□ -1.54
GYPB-208ENST00000507009 PANX3Q96QZ0 392 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 DMRTA2Q96SC8 542 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 NPAS2Q99743 824 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 C19orf43Q9BQ61 176 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 VKORC1Q9BQB6 163 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 PLCD4Q9BRC7 762 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 TRIM51Q9BSJ1 452 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 CARD6Q9BX69 1037 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 ENKD1Q9H0I2 346 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 CATSPERZQ9NTU4 200 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 LRFN1Q9P244 771 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 MTORP42345 2549 aa5.43□□□□□ -1.54
GYPB-208ENST00000507009 GTF3C1Q12789 2109 aa5.42□□□□□ -1.54
GYPB-208ENST00000507009 HCFC1P51610 2035 aa5.42□□□□□ -1.54
GYPB-208ENST00000507009 NIPBLQ6KC79 2804 aaeCLIP5.42□□□□□ -1.54
GYPB-208ENST00000507009 IGKV1-8A0A0C4DH67 115 aa5.42□□□□□ -1.54
GYPB-208ENST00000507009 GOLGA6L9A6NEM1 432 aa5.42□□□□□ -1.54
GYPB-208ENST00000507009 USP27XA6NNY8 438 aa5.42□□□□□ -1.54
GYPB-208ENST00000507009 A8MUA0 341 aa5.42□□□□□ -1.54
GYPB-208ENST00000507009 FOXO6A8MYZ6 492 aa5.42□□□□□ -1.54
GYPB-208ENST00000507009 PRMT5O14744 637 aaPredicted RBP5.42□□□□□ -1.54
GYPB-208ENST00000507009 SLC16A5O15375 505 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms