RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZC3H7AQ8IWR0 971 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 PRSS58Q8IYP2 241 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 BBOF1Q8ND07 529 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 SPATA4Q8NEY3 305 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ABHD11Q8NFV4 315 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 OR4K1Q8NGD4 311 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ANKRD7Q92527 254 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 FBXL8Q96CD0 374 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 MMABQ96EY8 250 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 VPS50Q96JG6 964 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 OR4K3Q96R72 315 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ERP44Q9BS26 406 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 FAM129AQ9BZQ8 928 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 LHPPQ9H008 270 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 MKKSQ9NPJ1 570 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 SMYD2Q9NRG4 433 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ARL15Q9NXU5 204 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 GRHL1Q9NZI5 618 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 LUZP4Q9P127 313 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 WHRNQ9P202 907 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 TRPC4Q9UBN4 977 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 NOVA2Q9UNW9 492 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 B3GNT3Q9Y2A9 372 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 HIVEP3Q5T1R4 2406 aa8.61□□□□□ -1.03
PDLIM5-209ENST00000506632 ESPL1Q14674 2120 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 PRRC2CQ9Y520 2896 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 MAST4O15021 2626 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 SPTBN1Q01082 2364 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 LOC102723996A0A087X1L8 192 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 FAM95CA0A1B0GW59 222 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 FEZF1A0PJY2 475 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 H0YIG0 161 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 MAP2K7O14733 419 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 FFAR3O14843 346 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 EIF3HO15372 352 aaKnown RBP eCLIP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 GPR42O15529 346 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 RAD51CO43502 376 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 LCMT2O60294 686 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 WISP3O95389 354 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 C1QAP02745 245 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 STATHP02808 62 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 CYC1P08574 325 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 ANXA5P08758 320 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 HIST1H2AGP0C0S8 130 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 HIST1H2ADP20671 130 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 VARSP26640 1264 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 UQCRFS1P47985 274 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 EMP2P54851 167 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 TAS2R39P59534 338 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 MRPS25P82663 173 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 SYT16Q17RD7 645 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 TMEM205Q6UW68 189 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 CYS1Q717R9 158 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 PRSS41Q7RTY9 318 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 ZNF572Q7Z3I7 529 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 STRA8Q7Z7C7 330 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 ZBED8Q8IZ13 594 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 IQCKQ8N0W5 287 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 ZADH2Q8N4Q0 377 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 FAM26EQ8N5C1 309 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 MFSD9Q8NBP5 474 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 OR9A4Q8NGU2 314 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 PPP4R1Q8TF05 950 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 ATL1Q8WXF7 558 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 PSMF1Q92530 271 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 TM9SF4Q92544 642 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 PYCR2Q96C36 320 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 C8orf44Q96CB5 159 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 VPS39Q96JC1 886 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 HIST1H2AHQ96KK5 128 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 BARD1Q99728 777 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 HIST1H2AJQ99878 128 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 WDR77Q9BQA1 342 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 HAUS8Q9BT25 410 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 H2AFJQ9BTM1 129 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 RHOJQ9H4E5 214 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 SLAMF7Q9NQ25 335 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 NSMCE4AQ9NXX6 385 aa8.6□□□□□ -1.03
PDLIM5-209ENST00000506632 POLEQ07864 2286 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 IGHV1-45A0A0A0MS14 117 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 TRBC2A0A5B9 178 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 CXorf49A8MYA2 514 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 HAX1O00165 279 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 CDC7O00311 574 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 VPS4BO75351 444 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 BMP10O95393 424 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 PRR35P0CG20 571 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 IL1RNP18510 177 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 GNLYP22749 145 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 SOX11P35716 441 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 AVPR1BP47901 424 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 MAT1AQ00266 395 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 CDKL1Q00532 357 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 ILF2Q12905 390 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 ZNF460Q14592 562 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 PCOLCEQ15113 449 aa8.59□□□□□ -1.03
PDLIM5-209ENST00000506632 AGAP7PQ5VUJ5 663 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms