RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SNX25Q9H3E2 840 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 ANAPC5Q9UJX4 755 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 PRDM4Q9UKN5 801 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 TDRD15B5MCY1 1934 aaKnown RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 A0A1W2PPW3 197 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 ANXA2P2A6NMY6 339 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 EPM2AB3EWF7 344 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 H3BMM5 538 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 ECE2O60344 883 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 PRKAR1AP10644 381 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 PDGFRAP16234 1089 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 PRKCIP41743 596 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 MFAP3P55082 362 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 HUNKP57058 714 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 CYCSP99999 105 aaKnown RBP3.24□□□□□ -1.89
CHD1-203ENST00000505657 MOGAT2Q3SYC2 334 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 FAAP20Q6NZ36 180 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 TMEM182Q6ZP80 229 aaPredicted RBP3.24□□□□□ -1.89
CHD1-203ENST00000505657 FCRLAQ7L513 359 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 ADCK2Q7Z695 626 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 C5orf24Q7Z6I8 188 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 DNAJB7Q7Z6W7 309 aaPredicted RBP3.24□□□□□ -1.89
CHD1-203ENST00000505657 GPC2Q8N158 579 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 FAM89BQ8N5H3 189 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 Q8NBF4 154 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 GDAP1L1Q96MZ0 367 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 BTBD9Q96Q07 612 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 OVOL2Q9BRP0 275 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 TRIM51Q9BSJ1 452 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 MED20Q9H944 212 aa3.24□□□□□ -1.89
CHD1-203ENST00000505657 ELF5Q9UKW6 265 aaPredicted RBP3.24□□□□□ -1.89
CHD1-203ENST00000505657 A0A087WV48 116 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TSPY2A6NKD2 308 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 KPNA7A9QM74 516 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 NPIPB9F8W1W9 429 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 IDH3BO43837 385 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 GBAP04062 536 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TSPY3P0CV98 308 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TSPY8P0CW00 308 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 KRT5P13647 590 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 MYL6BP14649 208 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 SELEP16581 610 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 ADRA2CP18825 462 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 PSMB4P28070 264 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 SFTPDP35247 375 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TSFMP43897 325 aaKnown RBP3.23□□□□□ -1.89
CHD1-203ENST00000505657 TSPY1Q01534 308 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TNK1Q13470 666 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 FASTKD3Q14CZ7 662 aaKnown RBP3.23□□□□□ -1.89
CHD1-203ENST00000505657 FAM189A2Q15884 450 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 RBBP7Q16576 425 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 FAM174BQ3ZCQ3 159 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 GLIPR1L2Q4G1C9 344 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TAF1BQ53T94 588 aaPredicted RBP3.23□□□□□ -1.89
CHD1-203ENST00000505657 LRRC73Q5JTD7 316 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 ZNF343Q6P1L6 599 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TTC27Q6P3X3 843 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TRIM65Q6PJ69 517 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 FRRS1Q6ZNA5 592 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 C11orf57Q6ZUT1 292 aaPredicted RBP3.23□□□□□ -1.89
CHD1-203ENST00000505657 TICAM2Q86XR7 235 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TCEANCQ8N8B7 351 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 GBP7Q8N8V2 638 aaPredicted RBP3.23□□□□□ -1.89
CHD1-203ENST00000505657 CCDC63Q8NA47 563 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 NUP37Q8NFH4 326 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 OR4C15Q8NGM1 316 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 ATP8B4Q8TF62 1192 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 HEXDCQ8WVB3 486 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 GTF3AQ92664 365 aaKnown RBP3.23□□□□□ -1.89
CHD1-203ENST00000505657 RAD54LQ92698 747 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 ANKRD9Q96BM1 317 aaPredicted RBP3.23□□□□□ -1.89
CHD1-203ENST00000505657 PGM2Q96G03 612 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 INTS14Q96SY0 518 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 LRRC61Q9BV99 259 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 HOXD1Q9GZZ0 328 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 LMAN1LQ9HAT1 526 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TBC1D13Q9NVG8 400 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 TEX10Q9NXF1 929 aaPredicted RBP3.23□□□□□ -1.89
CHD1-203ENST00000505657 PKD2L2Q9NZM6 624 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 HACD3Q9P035 362 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 PILRBQ9UKJ0 227 aa3.23□□□□□ -1.89
CHD1-203ENST00000505657 ERI2A8K979 691 aaKnown RBP3.22□□□□□ -1.89
CHD1-203ENST00000505657 PRSS46E5RG02 174 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 TLX2O43763 284 aaPredicted RBP3.22□□□□□ -1.89
CHD1-203ENST00000505657 SAP30O75446 220 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 FAM58BPP0C7Q3 252 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 TRIM49P0CI25 452 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 TRIM49CP0CI26 452 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 SPP1P10451 314 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 EPORP19235 508 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 SP100P23497 879 aaPredicted RBP3.22□□□□□ -1.89
CHD1-203ENST00000505657 PSMA3P25788 255 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 RBMS1P29558 406 aaKnown RBP3.22□□□□□ -1.89
CHD1-203ENST00000505657 PDHA2P29803 388 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 CETN2P41208 172 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 LMO4P61968 165 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 SGCGQ13326 291 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 LY6DQ14210 128 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 UGCGQ16739 394 aa3.22□□□□□ -1.89
CHD1-203ENST00000505657 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms