RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 IRX1P78414 480 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZC3H12BQ5HYM0 836 aaKnown RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 MAVSQ7Z434 540 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 FKBP10Q96AY3 582 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZNF317Q96PQ6 595 aaPredicted RBP7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 DPH7Q9BTV6 452 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 MEAF6Q9HAF1 191 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 SLC22A11Q9NSA0 550 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 OPTCQ9UBM4 332 aa7.91□□□□□ -1.14
CDC42SE2-208ENST00000505065 GVINP1Q7Z2Y8 2422 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 A0A0A6YYD5 115 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 PPP6CO00743 305 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 OTCP00480 354 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 DAB2P98082 770 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 ACY1Q03154 408 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 TCTE1Q5JU00 501 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 CACHD1Q5VU97 1274 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 ZCCHC7Q8N3Z6 543 aaKnown RBP7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 CHTF18Q8WVB6 975 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 MAGEB18Q96M61 343 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 POLR1BQ9H9Y6 1135 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 PRDM7Q9NQW5 492 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 CD274Q9NZQ7 290 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 FRYQ5TBA9 3013 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 TRBV23OR9-2A0A075B6M9 112 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 H0YIG0 161 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 CLGNO14967 610 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 DSCR3O14972 297 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 TIAF1O95411 115 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 EPB42P16452 691 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 MAGP20916 626 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 EFNA3P52797 238 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 FRA10AC1Q70Z53 315 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 C17orf64Q86WR6 236 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 KIRREL3Q8IZU9 778 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 AMER3Q8N944 861 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 Q8N9G6 341 aaPredicted RBP7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 AGBL5Q8NDL9 886 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 ARMC2Q8NEN0 867 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 OR7G3Q8NG95 312 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 OR4F6Q8NGB9 312 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 WDR36Q8NI36 951 aaKnown RBP7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 MS4A6EQ96DS6 147 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 TGM7Q96PF1 710 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 DDX31Q9H8H2 851 aaKnown RBP7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 KCNE2Q9Y6J6 123 aa7.9□□□□□ -1.14
CDC42SE2-208ENST00000505065 CPED1A4D0V7 1026 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 SPAG7O75391 227 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 TGDSO95455 350 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 ID4P47928 161 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 SIM1P81133 766 aaPredicted RBP7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 TMEM35AQ53FP2 167 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 CGB2Q6NT52 195 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 NIPAL1Q6NVV3 410 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 DHRS13Q6UX07 377 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 TRIM73Q86UV7 250 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 PDSS2Q86YH6 399 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 NTNG2Q96CW9 530 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZNF578Q96N58 590 aaPredicted RBP7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 MECRQ9BV79 373 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 ATG10Q9H0Y0 220 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 IPPKQ9H8X2 491 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 KCMF1Q9P0J7 381 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 PPIEQ9UNP9 301 aaKnown RBP7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 LOXL2Q9Y4K0 774 aa7.9□□□□□ -1.15
CDC42SE2-208ENST00000505065 LOC105369274A0A096LPK9 316 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 LOC102723532A0A0G2JNH3 316 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 CLDN9O95484 217 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 TYRP1P17643 537 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 BSGP35613 385 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ASPHQ12797 758 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 TUBB3Q13509 450 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 TBC1D25Q3MII6 688 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 FAM92BQ6ZTR7 304 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 MCATQ8IVS2 390 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 OR4N4Q8N0Y3 316 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ARMC10Q8N2F6 343 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 UTP15Q8TED0 518 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 NCSTNQ92542 709 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 MRRFQ96E11 262 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 WDR54Q9H977 334 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 PDE7BQ9NP56 450 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 TMEM45AQ9NWC5 275 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 WWOXQ9NZC7 414 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 KLK13Q9UKR3 277 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 CCDC88CQ9P219 2028 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 TXNDC9O14530 226 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ZSCAN9O15535 394 aaPredicted RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ITM2AO43736 263 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 PRAMEF10O60809 474 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 UROSP10746 265 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 VARSP26640 1264 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 HNRNPH1P31943 449 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 HNRNPFP52597 415 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 ABCE1P61221 599 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 PRKAA1Q13131 559 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 TARDBPQ13148 414 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 EXOSC6Q5RKV6 272 aaKnown RBP7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 FAM198BQ6UWH4 519 aa7.89□□□□□ -1.15
CDC42SE2-208ENST00000505065 CHSY3Q70JA7 882 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms