RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 C10orf90Q96M02 699 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SLC46A1Q96NT5 459 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 KCNA7Q96RP8 456 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 HAUS8Q9BT25 410 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SLC6A16Q9GZN6 736 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 CENPHQ9H3R5 247 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 NT5DC2Q9H857 520 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 NOL11Q9H8H0 719 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 AKIRIN1Q9H9L7 192 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PELI2Q9HAT8 420 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 MRPS30Q9NP92 439 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 MED4Q9NPJ6 270 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SEMA4BQ9NPR2 832 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SLC22A11Q9NSA0 550 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 FGF21Q9NSA1 209 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 WWOXQ9NZC7 414 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 OPTCQ9UBM4 332 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 KLHL3Q9UH77 587 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PPT2Q9UMR5 302 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 MRPS2Q9Y399 296 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 DNAJC15Q9Y5T4 150 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 KCNE2Q9Y6J6 123 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 AP1M2Q9Y6Q5 423 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SCN2AQ99250 2005 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 BOD1L1Q8NFC6 3051 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TRBC2A0A5B9 178 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 A8MU76 341 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TMEM233B4DJY2 109 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 H0YGG7 62 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 LCE2BO14633 110 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 FOXS1O43638 330 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 NPHS1O60500 1241 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 CCNT2O60583 730 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 DNAJB6O75190 326 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SMIM24O75264 130 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 LYPLA1O75608 230 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SUPT7LO94864 414 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 OR4F21O95013 312 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ESRRBO95718 433 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 DLGAP3O95886 979 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 JUPP14923 745 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 CHN1P15882 459 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SPINK2P20155 84 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 NR1D1P20393 614 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 CDH3P22223 829 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 HRH2P25021 359 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 HNRNPH1P31943 449 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 AHRP35869 848 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SEPHS1P49903 392 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ARF3P61204 181 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 BST1Q10588 318 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 LCP2Q13094 533 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PRKAA1Q13131 559 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 CHIT1Q13231 466 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 EIF3IQ13347 325 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 KIAA0040Q15053 153 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 HKDC1Q2TB90 917 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 DEFB110Q30KQ9 67 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ARL13AQ5H913 290 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 LIPJQ5W064 366 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 GRHL2Q6ISB3 625 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PWWP2BQ6NUJ5 590 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TMEM214Q6NUQ4 689 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 Q6ZSR9 355 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 RAB11FIP2Q7L804 512 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TIPARPQ7Z3E1 657 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 MAVSQ7Z434 540 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 UBE3DQ7Z6J8 389 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TMPRSS11BQ86T26 416 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 C17orf64Q86WR6 236 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PDSS2Q86YH6 399 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 AGBL5Q8NDL9 886 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TRPC4APQ8TEL6 797 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 GATA6Q92908 595 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF775Q96BV0 537 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PTCD3Q96EY7 689 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 AHCYL2Q96HN2 611 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SCYL1Q96KG9 808 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TMEM74Q96NL1 305 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ZFYVE21Q9BQ24 234 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 MACROD1Q9BQ69 325 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SCNM1Q9BWG6 230 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 MS4A8Q9BY19 250 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 B3GNT4Q9C0J1 378 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 NRSN2Q9GZP1 204 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PITHD1Q9GZP4 211 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 STMN4Q9H169 189 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 FARSBQ9NSD9 589 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 FOXJ2Q9P0K8 574 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ZDHHC2Q9UIJ5 367 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ZFP69BQ9UJL9 534 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SNX7Q9UNH6 387 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SATB2Q9UPW6 733 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 CLDN16Q9Y5I7 305 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 B3GALT1Q9Y5Z6 326 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 DSPP15924 2871 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ITPR1Q14643 2758 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ACACAQ13085 2346 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms