RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 CCDC172P0C7W6 258 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 MC4RP32245 332 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 TRHRP34981 398 aaPredicted RBP11.69□□□□□ -0.54
LSM6-204ENST00000504181 SNRPNP63162 240 aaKnown RBP11.69□□□□□ -0.54
LSM6-204ENST00000504181 KRT31Q15323 416 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 HSPB2Q16082 182 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 CHRFAM7AQ494W8 412 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 CCDC38Q502W7 563 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 FBXO42Q6P3S6 717 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 TAS2R42Q7RTR8 314 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 MAP7D3Q8IWC1 876 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 NAXEQ8NCW5 288 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 OR2L3Q8NG85 312 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 ELP5Q8TE02 316 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 RNF157Q96PX1 679 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 FSD1LQ9BXM9 530 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 ZDHHC11Q9H8X9 412 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 YAE1D1Q9NRH1 226 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 DEPPQ9NTK1 212 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 SMARCAL1Q9NZC9 954 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 IMPACTQ9P2X3 320 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 KLK4Q9Y5K2 254 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 A0A087X1B8 175 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 OR2A25A4D2G3 310 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 ACOT7O00154 380 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 FCHO1O14526 889 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 AGTP01019 485 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 FTH1P02794 183 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 MYBL1P10243 752 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 GZMAP12544 262 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 XCR1P46094 333 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 AVPR1BP47901 424 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 SRSF2Q01130 221 aaKnown RBP11.68□□□□□ -0.54
LSM6-204ENST00000504181 PDK1Q15118 436 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 DNAJC21Q5F1R6 531 aaKnown RBP11.68□□□□□ -0.54
LSM6-204ENST00000504181 WLSQ5T9L3 541 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 GARNL3Q5VVW2 1013 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 TRILQ7L0X0 811 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 DCUN1D3Q8IWE4 304 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 ARHGEF39Q8N4T4 335 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 OR9A4Q8NGU2 314 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 PPP1R14CQ8TAE6 165 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 OLFM3Q96PB7 478 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 DPH7Q9BTV6 452 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 UBTD1Q9HAC8 227 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 TRMT1Q9NXH9 659 aaKnown RBP11.68□□□□□ -0.54
LSM6-204ENST00000504181 HCN3Q9P1Z3 774 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 DUSP10Q9Y6W6 482 aa11.68□□□□□ -0.54
LSM6-204ENST00000504181 TRBV5-4A0A0C4DH59 114 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 KRT87PA6NCN2 255 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 QSOX1O00391 747 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 P2RX6O15547 441 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 VPS26AO75436 327 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 AP2A2O94973 939 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 TP53P04637 393 aaPredicted RBP11.67□□□□□ -0.54
LSM6-204ENST00000504181 RPN2P04844 631 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 TPM2P07951 284 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 ARHGAP25P42331 645 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 PTH2RP49190 550 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 NR1H2P55055 460 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 WNT3P56703 355 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 TYRO3Q06418 890 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 PTK6Q13882 451 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 ABRAXAS2Q15018 415 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 DBN1Q16643 649 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 GPR33Q49SQ1 333 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 SEM1Q6ZVN7 128 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 PRSS41Q7RTY9 318 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 VRK3Q8IV63 474 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 OR51Q1Q8NH59 317 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 SMPDL3BQ92485 455 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 TSLPQ969D9 159 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 RBCK1Q9BYM8 510 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 TTTY12Q9BZ98 90 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 PLA2G12AQ9BZM1 189 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 AMBRA1Q9C0C7 1298 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 TENM1Q9UKZ4 2725 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 NINQ8N4C6 2090 aa11.67□□□□□ -0.54
LSM6-204ENST00000504181 A0A0G2JMM0 328 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 A0A1W2PPB8 328 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 A0A1W2PRS3 328 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 C5orf60A6NFR6 353 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 KIR3DP1A8MWS1 328 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 AQP7O14520 342 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 CDC123O75794 336 aaPredicted RBP11.66□□□□□ -0.54
LSM6-204ENST00000504181 IGHG3P01860 377 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 TUBB4AP04350 444 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 MAGEA5P43359 124 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 MAN2A2P49641 1150 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 ZNF140P52738 457 aaPredicted RBP11.66□□□□□ -0.54
LSM6-204ENST00000504181 OR4D2P58180 307 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 TAS2R40P59535 323 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 SORDQ00796 357 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 MPP3Q13368 585 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 TNK1Q13470 666 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 NSDHLQ15738 373 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 DPCR1Q3MIW9 517 aa11.66□□□□□ -0.54
LSM6-204ENST00000504181 ZNF571Q7Z3V5 609 aaPredicted RBP11.66□□□□□ -0.54
LSM6-204ENST00000504181 SLC22A16Q86VW1 577 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms