RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SOX30O94993 753 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 PDYNP01213 254 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 FPR1P21462 350 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 FSHRP23945 695 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CCR7P32248 378 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CHI3L1P36222 383 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CLK3P49761 638 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ARSFP54793 590 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TP53BP2Q13625 1128 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SLC36A3Q495N2 470 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SNAP47Q5SQN1 464 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 LCTLQ6UWM7 567 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 LINC00299Q6ZSB3 139 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 AMZ2Q86W34 360 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 OR56A3Q8NH54 315 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 CDC26Q8NHZ8 85 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ADAMTS19Q8TE59 1207 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SMPDL3AQ92484 453 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 NCSTNQ92542 709 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 OTUB1Q96FW1 271 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 TEFMQ96QE5 360 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ABCG8Q9H221 673 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 ANKHQ9HCJ1 492 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 DCAF13Q9NV06 445 aaKnown RBP7.17□□□□□ -1.26
PDGFC-203ENST00000502773 GULP1Q9UBP9 304 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 FBXO10Q9UK96 956 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 OAZ3Q9UMX2 235 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 SLC22A14Q9Y267 594 aa7.17□□□□□ -1.26
PDGFC-203ENST00000502773 PIPSLA2A3N6 862 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 CRYZL1O95825 349 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 SLC35G4P0C7Q5 338 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 HSMCR30P0CW71 290 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 AMD1P17707 334 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 GSSP48637 474 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 CXCR4P61073 352 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 ABATP80404 500 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 CREB5Q02930 508 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 SPIDRQ14159 915 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 CES5AQ6NT32 575 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 LIPIQ6XZB0 460 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 LRRTM4Q86VH4 590 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 KRT73Q86Y46 540 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 FAM156AQ8NDB6 213 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 MOAP1Q96BY2 351 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 BOCQ9BWV1 1114 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 NEUROD4Q9HD90 331 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 BRD7Q9NPI1 651 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 SLC35C2Q9NQQ7 365 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 COQ3Q9NZJ6 369 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 SH3BP4Q9P0V3 963 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 MSRAQ9UJ68 235 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 TSR3Q9UJK0 312 aaKnown RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 NYNRINQ9P2P1 1898 aaKnown RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 URADA6NGE7 173 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 LRRC14BA6NHZ5 514 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 SCAMP3O14828 347 aaKnown RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 CPSF4O95639 269 aaKnown RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 DBTP11182 482 aaKnown RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 MSX2P35548 267 aaPredicted RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 CCT3P49368 545 aaKnown RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 HLCSP50747 726 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF763Q0D2J5 394 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 LSAMPQ13449 338 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 TSTA3Q13630 321 aaPredicted RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 PHKG1Q16816 387 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 SPANXN4Q5MJ08 99 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 GCNT6Q5T4J0 391 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 RPS27LQ71UM5 84 aaKnown RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 C7orf57Q8NEG2 295 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 SPPL3Q8TCT6 385 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 RAB2BQ8WUD1 216 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 MYDGFQ969H8 173 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 SLC22A12Q96S37 553 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 REEP4Q9H6H4 257 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 ADAM29Q9UKF5 820 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 IRGMA1A4Y4 181 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 NOBOXO60393 691 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF682O95780 498 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 ABCB1P08183 1280 aaPredicted RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 TIA1P31483 386 aaKnown RBP eCLIP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 IFNGR2P38484 337 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 MMP12P39900 470 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 NRIP1P48552 1158 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 TMBIM6P55061 237 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 PHC1P78364 1004 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 OLR1P78380 273 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 GPM6BQ13491 265 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 IHHQ14623 411 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 VMACQ2NL98 169 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 RABL3Q5HYI8 236 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 PAGE3Q5JUK9 113 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 OR2T5Q6IEZ7 315 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 KLHL35Q6PF15 583 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 ZNF773Q6PK81 442 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 DLEU7Q6UYE1 221 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 Q6ZVL8 140 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 EIF3MQ7L2H7 374 aaKnown RBP7.16□□□□□ -1.26
PDGFC-203ENST00000502773 DET1Q7L5Y6 550 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 CAMKMTQ7Z624 323 aa7.16□□□□□ -1.26
PDGFC-203ENST00000502773 GRAMD2AQ8IUY3 354 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms